These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATAAGGTTACCGCACTGCGGCCCACGAGTGGGGAGGATG | 1 | 1.53513e-05 |
| AATAAGTTACCTAGTGTAAAGTCTCATTAAAAGATCGTGC | 1 | 1.53513e-05 |
| AATAATAAGACAGTAGCAACGCTGACGGTGATCCGTGCTC | 1 | 1.53513e-05 |
| AATAATCCATATAATATGGGTACACAAAGAGAACCCAGTC | 1 | 1.53513e-05 |
| AATAATCCTGTTGAGGTAGGAGGGTCAATACGCCCCCCGG | 1 | 1.53513e-05 |
| AATAATCGATCGGGGGATTAGCCATGCGCGGTGCGCGTAA | 1 | 1.53513e-05 |
| AATAATCTGTGCTTGCGTGTGAAAATTGGTGAGGGTACCG | 1 | 1.53513e-05 |
| AATAATGAACGTGGATAATATTAGTGGGACGTCAGATTCT | 1 | 1.53513e-05 |
| AATAATGACTATTGGAGGGGTGTCACTGAGATCGAGCCGC | 1 | 1.53513e-05 |
| AATAATGCGTGCTCATATTTAGGCAATGCAGTATTCACTT | 1 | 1.53513e-05 |
| AATAATGTTGGCGTGCTACGAGGTGAGGTTTGTTTCCCAA | 1 | 1.53513e-05 |
| AATAATGTTGGTAGAGTCGTGGGGCACGTGGAATCTCGTT | 1 | 1.53513e-05 |
| AATAATTATTCGGGGGATTACAAGTGAGACTCGCTCTGGT | 1 | 1.53513e-05 |
| AATACACCAAGTTTCACCGGCCAGATTGTGAAGGCCATTG | 1 | 1.53513e-05 |
| AATACACCCTTGGGTGGCGATCATAGTTAGCTTAGCGGGA | 1 | 1.53513e-05 |
| AATACACGCGACGTGGTGGTACGCTGGTCAGACACAAGGA | 1 | 1.53513e-05 |
| AATACACTGGCGGGAATTTGGTTATTTGGTTGTTGGTTGG | 1 | 1.53513e-05 |
| AATACAGCGTGGGGCGGTCGTGGACCGACAGTCTCGGGGG | 1 | 1.53513e-05 |
| AATACAGTGTCGAGTGTGGGGCCCCCACTGTGTGCGCGAC | 1 | 1.53513e-05 |
| AATACAGTTTAGTGGGACGGGCTCGTGGAAATGTGGCTCA | 1 | 1.53513e-05 |
| AATACANCGTGGGGCGGTCGTGGACCGACAGTCTCGGGGG | 1 | 1.53513e-05 |
| AATACATCTGGGCCGGTTGTGCTACGGTGGACCAACATTA | 1 | 1.53513e-05 |
| AATACATTTGCGGTGGGGGAAGCGAGCCAAAAGGTCGCGA | 1 | 1.53513e-05 |
| AATACCACACTGAAGTTCGTCGGTGTGCGGACGAGTCCAG | 1 | 1.53513e-05 |
| AATACCGGAGGACTCAGGCTGGAAGTCGGCTCGCATCAGG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.