These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATCAGCGTAAGCGACGATCAGAGTGGGGTTTCACAGTGG | 1 | 1.53513e-05 |
| AATCAGGATGCCCACAACGTGTTCACAGCTATGAGGCGGC | 1 | 1.53513e-05 |
| AATCAGGGGATCCGTAACTTGATTACACAATCATGTTTTT | 1 | 1.53513e-05 |
| AATCAGGGGGCGCGGCTACGTTCTCCATAAACTTCCTAAG | 2 | 3.07026e-05 |
| AATCAGGGTGGCGTGGTGACGTACTAGGTGTGCTGTGGGT | 1 | 1.53513e-05 |
| AATCAGGTGGCACAGCGATTTATTAGGGTATTTCCGGGAT | 1 | 1.53513e-05 |
| AATCAGTCGGAGGGGGTAATCGCAAACAAGAGTTGTTGTA | 1 | 1.53513e-05 |
| AATCAGTGGTGGACTGAGGGTGGATCTCGTTCAGAGGGTC | 1 | 1.53513e-05 |
| AATCAGTGTCCATGGAATCGGTGTCAGGTGGTGGACTGGA | 1 | 1.53513e-05 |
| AATCAGTTCGTGAGTAGCTCGGTTGTGGAATAGTGGGGTA | 1 | 1.53513e-05 |
| AATCAGTTTGTGTTAATAACGCGTGGTCAGGTCGAGGTTG | 1 | 1.53513e-05 |
| AATCATCGGGATGAGGACTGTTGCGCTTACAGGGACAATG | 1 | 1.53513e-05 |
| AATCATCTTCATAGCGTGCTGATTAATGTAGCTATTAGAC | 1 | 1.53513e-05 |
| AATCATGAAGAGGCGTGTGGATCGCTACTTATATCGTAAG | 1 | 1.53513e-05 |
| AATCATGACGCTCTGTTTCTCAACACACCGAATCCTTCGT | 1 | 1.53513e-05 |
| AATCATGATTTTGAACGGTAGGGACATGGAGTGTGACGAG | 1 | 1.53513e-05 |
| AATCATGCACGTGGGCGCACTCTTAATAAGTAAATGCACA | 1 | 1.53513e-05 |
| AATCATGCGTACTGGATCGGTCTCGCGGGGGTCAGGGTGC | 1 | 1.53513e-05 |
| AATCATTTCACGCTAATTTAATAGAGTATCGGTATATGGA | 1 | 1.53513e-05 |
| AATCCAAGGATTAAGCTCAGCGATGCAGGATATGTAAGGT | 1 | 1.53513e-05 |
| AATCCAATCCGTACGGGGGATTGATTGGGTTCGTGTGTCT | 1 | 1.53513e-05 |
| AATCCACACCTTGGGGGTAACGTGGTTTAGGGCGTGCTTT | 1 | 1.53513e-05 |
| AATCCACACTTGCTAGTAGATTGCTGGCACCACTCGGGCT | 1 | 1.53513e-05 |
| AATCCACATTAGTAGAAGGTTTGAGGGTTTTCGATCGTGT | 1 | 1.53513e-05 |
| AATCCACGCGTGTGGGCGGATGGCGATGTGGCATGGGGTG | 2 | 3.07026e-05 |
Read fractions use all reads in this source file as the denominator.