These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATGAGGACATTTTGCCGCGACCGACCATTCGAAGGTCTG | 1 | 1.53513e-05 |
| AATGAGGCGTGAGGGAAAGGACGTGTCATTGCTGGGTGGC | 1 | 1.53513e-05 |
| AATGAGGGATTCGGGAGTCGACGCAAGTAAGGAAGGGCAT | 1 | 1.53513e-05 |
| AATGAGGGGGTGTCGTTGGGTAATAGGTGGTTTTTATTCT | 1 | 1.53513e-05 |
| AATGAGGTATCTTCGTTAACGTGGAAAAGTGCTCCTGTCA | 1 | 1.53513e-05 |
| AATGAGGTGTCCGGGGATGCGCGGGGTTGTACGAGTGGAC | 1 | 1.53513e-05 |
| AATGAGTCGTGATTGCGCACGGCGCATGTGGTGGGTAGCA | 1 | 1.53513e-05 |
| AATGAGTGCTTGCTTCCGCCGTGTGGGACAGTGACTGCGC | 1 | 1.53513e-05 |
| AATGAGTGGGGTCCGTTAGGTACCGGGGTTGACGTGCCAA | 1 | 1.53513e-05 |
| AATGAGTGGTTTACAGAGGCGAAGGATGGGGTGTGAGATT | 1 | 1.53513e-05 |
| AATGAGTTGGCAAGTATTTGAGAGGGGGTCGTCACCAAAT | 1 | 1.53513e-05 |
| AATGATAGCGCCTGGGCATATAACCAATCAGCCAGGCAGG | 1 | 1.53513e-05 |
| AATGATCTCCAGTTTTAACACGGTCGCGTGGTGCCGATTT | 1 | 1.53513e-05 |
| AATGATGAAAGAGTATTAGCAGATCGAACAGTGGGCCAAT | 1 | 1.53513e-05 |
| AATGATGATTTGGCGTGATTAGGAGATCGCCTGATGAATA | 1 | 1.53513e-05 |
| AATGATGCACCACCGTACGGGCGTGTGGCTTCGCCGCTGG | 1 | 1.53513e-05 |
| AATGATGTACACCTTTTTGCAGAAAGGTGATGGTCTGAAA | 1 | 1.53513e-05 |
| AATGATGTCTAATGATTTCGTGGTGCGTGGGTGCTCCCGT | 1 | 1.53513e-05 |
| AATGATGTTGCTAAGCGATCAGAATCGTGCCGAAGGCCAT | 1 | 1.53513e-05 |
| AATGATTAAACTCGAAGATAGTGATGACGTAGTTAGCTGA | 1 | 1.53513e-05 |
| AATGATTCATTGTTGTGGGAGAGGTGTACACCCGTGATTT | 1 | 1.53513e-05 |
| AATGATTCCCCGACTTTATGGGTAGTTGTGAGGTAAGCGA | 1 | 1.53513e-05 |
| AATGATTCTAAATGACTTGGATTGTTCAGTCCATGTCGCC | 1 | 1.53513e-05 |
| AATGATTGTGAGGAGCGGATAAGTGTGCAGCGTGTGACAT | 1 | 1.53513e-05 |
| AATGATTTCCTCGGTAGTAGTGGGTGAATCGCGGGACGCG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.