These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATGGATATGTGGGCTGCGGTTAGCTGAGAGCGGGCGTGG | 1 | 1.53513e-05 |
| AATGGATCTATTGGGAGAGTTCACCGCTAACAGTCTGGGG | 1 | 1.53513e-05 |
| AATGGATGGTTGGGGGTACGGGAAAGATGTGGCGTGATTG | 1 | 1.53513e-05 |
| AATGGATGTTAGCTGGGAACATTACTCAGTGTTCGAGTGG | 1 | 1.53513e-05 |
| AATGGATTGCATGCGGGCTGCGCGTGCGGCTTCGAAAGGT | 1 | 1.53513e-05 |
| AATGGCACGCAGCCATCTGCATCATGGTTGGCGAGACGTG | 1 | 1.53513e-05 |
| AATGGCCCGTATATATGTCGTGTGTGAATGTGGATGGGTT | 1 | 1.53513e-05 |
| AATGGCCGGAGCCCATGGCTGTTTCGGAGGAGCAAAAGGA | 1 | 1.53513e-05 |
| AATGGCCGGAGTTGAGATAGCGTGGAGAGTCTTGTGATAC | 1 | 1.53513e-05 |
| AATGGCGCGTGAGATTGCGTGGTGGCTTCCTCGTAAGGCA | 1 | 1.53513e-05 |
| AATGGCGGAGTGGACGTGAGTGGGAGAACACAGGAGTGGT | 1 | 1.53513e-05 |
| AATGGCGGCCGTACAGTATGGTGTCCTGGCTTCTGTGTAT | 1 | 1.53513e-05 |
| AATGGCGTGCTACGACTCACAGGGGAGACACGCGGAAACA | 1 | 1.53513e-05 |
| AATGGCGTTCTAGGGGTGTGAGCTAGGCGATGGAGAGCTC | 1 | 1.53513e-05 |
| AATGGCTCCTTGGAGTAGAGCGCACGGCCAAAAGCATTTC | 1 | 1.53513e-05 |
| AATGGCTCTTCCTGCGCTCTCTTCTGGCGTGAGGGTTCAC | 1 | 1.53513e-05 |
| AATGGCTGGGAGGGAGTGGGGGGCTGGAGGATAAGTTGCT | 1 | 1.53513e-05 |
| AATGGGAATTCATGTGTGGACCATTGGCTTTTCGGCTTGT | 1 | 1.53513e-05 |
| AATGGGACATCGCCGGCTGCATAGGGGACGTGGGCGAGGG | 1 | 1.53513e-05 |
| AATGGGACCGTTCCGAAGTGGGAAGCGTGGACCTAGGAAT | 1 | 1.53513e-05 |
| AATGGGACTTCCACTAGGGGGTTGGTCAGGTGTGGGGATA | 1 | 1.53513e-05 |
| AATGGGATGGGACAGTATGAGTACTGATAGGATGGGGTGT | 1 | 1.53513e-05 |
| AATGGGCGGGGAGCATGGCCGTGTGCTTAGATTTGTAGGG | 1 | 1.53513e-05 |
| AATGGGGAAAGTACTACGTGGAGACTGTTTAGGGGAGTGG | 1 | 1.53513e-05 |
| AATGGGGACAACGCACTAGGTGGTCACCTGGCGAGTGGGT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.