These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATGGTTCCGCCTGGTGTGTGGTGATCTGAAGTCATTTGA | 1 | 1.53513e-05 |
| AATGGTTTGTCCCCGGTGTGCTTGTATGGTGAAGAGTCTG | 1 | 1.53513e-05 |
| AATGTAAAAACACGGGAGGACACGGAAGTAGCTTTCGTCA | 2 | 3.07026e-05 |
| AATGTAAAGATCATTGTAGTTCGTGGGTGGGGGGTTGTGT | 1 | 1.53513e-05 |
| AATGTAACCATTAAATGACCACGACGAGCCATTGGGCTAA | 2 | 3.07026e-05 |
| AATGTAAGAGCCTCAGCGATTTGGGACGAGTCGCACATTT | 1 | 1.53513e-05 |
| AATGTAAGGCAATGTCGAGGTCCATGATGATGGTAGTAGC | 1 | 1.53513e-05 |
| AATGTAAGGTTAAGCCTATGTAAAGGTGGGGGTGGAGTTA | 1 | 1.53513e-05 |
| AATGTAATGGGGGGGCGGGTGCATTGATCAGAGAACAGGG | 1 | 1.53513e-05 |
| AATGTACACTGTCGACATTTAGATGCTGTTGAGGTGGTAA | 1 | 1.53513e-05 |
| AATGTACCAGCGGTCGGGAGTGGTCTGTTGGGGGTGGATG | 1 | 1.53513e-05 |
| AATGTACCGCGGGAACTTGAGCGAATTTCACGGCTGTGGA | 1 | 1.53513e-05 |
| AATGTAGAGCAGGTAGTTAATCGGCCGCCTGGTCAATTCA | 1 | 1.53513e-05 |
| AATGTAGAGCATGCGGGGAGGGGGTTATTATGCCCACGCG | 1 | 1.53513e-05 |
| AATGTAGCACCACTCGTAACGATGGGGATAAGGCTCGAGT | 1 | 1.53513e-05 |
| AATGTAGCGATTGGTGTTGTGGCACGGTGGGCTGAGTGCA | 1 | 1.53513e-05 |
| AATGTAGCGCGACAACGCGTTGATAGTGGGGGTAAAGATA | 1 | 1.53513e-05 |
| AATGTAGCTTGACACTGCGGTGGAGTTGTCTAGCGGGGTG | 1 | 1.53513e-05 |
| AATGTAGTTTGAGTTTTGGTGGTGCTGCCCTTGGGTGGTC | 1 | 1.53513e-05 |
| AATGTATAGTCCGCAGATTTCGTCGCTAGGTGTGGGGTTG | 1 | 1.53513e-05 |
| AATGTCACAGGGAGGGTGCAACCCGTTAATGTGATAAGGG | 1 | 1.53513e-05 |
| AATGTCACGTCTTTTGGCAGCCTTTTCAAGAGTGGGTCAT | 1 | 1.53513e-05 |
| AATGTCAGTTTGGTCGGTCGGGGCGAGGTTTTTGGTCGTG | 1 | 1.53513e-05 |
| AATGTCCACAGTTCTCATACGTCGTGTACTACCGCTTTGT | 1 | 1.53513e-05 |
| AATGTCCGTGGGCATGTACAGGCGGGTACGGTAAATTACC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.