These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATTGGGGTCAACAGGGACTTCAACCTAGCGTGAACTCAG | 2 | 3.07026e-05 |
| AATTGGGTACGTACGTCCGGGGCCAATGGACTCGGTCCGG | 1 | 1.53513e-05 |
| AATTGGGTATCTGAGTGACACCGCCGCGTGTCCACATTTC | 1 | 1.53513e-05 |
| AATTGGGTCACGTGGGGCGTCGGATGCGTGGGCCCATCGA | 1 | 1.53513e-05 |
| AATTGGGTGAGGAATGTTTCGGCTTTGTTGATAAAGTGGG | 1 | 1.53513e-05 |
| AATTGGTGGAGACGTATCTGCGTGGGTTGCTGACGTAGTA | 1 | 1.53513e-05 |
| AATTGGTGGGTGGGGACACGAGTGGTAGTCAGGACCGACC | 1 | 1.53513e-05 |
| AATTGGTGTGAGGTTTCGTTCTGTATGTATCTCGGTGCAG | 1 | 1.53513e-05 |
| AATTGGTGTTGATCGTGTATGCATTTGGGGATGGTCCATG | 1 | 1.53513e-05 |
| AATTGGTTTGTTGTTAGAGTTTCTTGAGTGGCTCACGAGA | 1 | 1.53513e-05 |
| AATTGTAGCGGCGTGGAACGTCGTAATCCAGGTGTAGAGC | 1 | 1.53513e-05 |
| AATTGTATAGTGAACAGTGGTCTGGTTCCACCACGCGATT | 1 | 1.53513e-05 |
| AATTGTCACTTATAACGCCACGAACTCCGTGGAAAGTGGA | 1 | 1.53513e-05 |
| AATTGTGTTGATAAAGTGTCTTCTGAGGTGGATTTAAATG | 1 | 1.53513e-05 |
| AATTGTTCTATGTTGGTACCACGACCGGCATGCACGAGCG | 1 | 1.53513e-05 |
| AATTGTTGTACGTCTGAGGGGCCCAGTGTGGATGAGTGGA | 1 | 1.53513e-05 |
| AATTGTTTCGTGCTATACCCGTGCAGTAGCGTGCGTCGCG | 1 | 1.53513e-05 |
| AATTTAAAACTTAATGGGTGGAATCCTGGGGGGCACCCAG | 1 | 1.53513e-05 |
| AATTTAAACAATAGAAGAATCTAGGTTGGTTGCGTGGATC | 1 | 1.53513e-05 |
| AATTTAAAGGAATTTTTGTAGGTCCCAATGTGGAGGGCCG | 1 | 1.53513e-05 |
| AATTTAAGCCACGCTCGGGGCTTATAGCGTGCAATGGGCG | 1 | 1.53513e-05 |
| AATTTAAGGTGTCGTGGAAATCAGGCTTTGTATCGTGGTC | 1 | 1.53513e-05 |
| AATTTAATGTGAAACGTGGGTCAAAAGTTTCCCACGAACA | 1 | 1.53513e-05 |
| AATTTACGAGGGTAGTTGCAGGTTCGCGTGACTCAAATGA | 1 | 1.53513e-05 |
| AATTTACTTCGCTAGCGAAAAGGGCAGCGAGATTTGGAGG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.