These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAAAACCCATTCTTTTCAGAACCTTAGAGCAAGTCTTAT | 2 | 3.07026e-05 |
| ACAAAACTGGTGGTGTGGTTGTGACCAGGTGTCATGAGTG | 1 | 1.53513e-05 |
| ACAAAACTTCCGGGGAGGTTGCGATGACCTCTGTGTGACT | 1 | 1.53513e-05 |
| ACAAAATCACGTGTCCGTCACTGATAGCGAAGGACGTGGG | 1 | 1.53513e-05 |
| ACAAAATCAGGCCCCCCAACGTGGGCACCAGCAAGTCGCA | 1 | 1.53513e-05 |
| ACAAAATCTAATTCCCGTGCCCTCGGTTTCAACGATGCAC | 1 | 1.53513e-05 |
| ACAAAATGGAAGTTAGTCACCCTCGTGTTTCGAACGGGGT | 1 | 1.53513e-05 |
| ACAAACAAGTGGACCAATCGGAGTCACTAGGGGAGTGCGT | 1 | 1.53513e-05 |
| ACAAACAATATCATCAATTCCGTGGATTGAAGGGCCCGGA | 1 | 1.53513e-05 |
| ACAAACACAAAGTGGGAAAATGCAGAGCTTATGGCGTGCA | 1 | 1.53513e-05 |
| ACAAACATGTAGTGGTATAGATGGCGGATCCTGAACAAAC | 1 | 1.53513e-05 |
| ACAAACATTATTCACGGACATCCCAGCCCGCGCAGTTAGT | 1 | 1.53513e-05 |
| ACAAACCGATCTAGTGCCATGGCCCAGAGTCGGTCGGTTT | 1 | 1.53513e-05 |
| ACAAACGCTGCACGCTGGAGAACGGGCGAAAGAGACCGTG | 1 | 1.53513e-05 |
| ACAAACGTCGATGGTAGCAACCTGCGTCTATCGTGGATTT | 1 | 1.53513e-05 |
| ACAAACTAATCGTGATGGGAGTAGGCAGTTTTTCGTGGGG | 1 | 1.53513e-05 |
| ACAAACTACGGGGACACGGTGCAGTAACGTTGCCGGCACG | 1 | 1.53513e-05 |
| ACAAAGAACAAGTGTTGGTACCGGGCTCTCCCTGGCGGTG | 1 | 1.53513e-05 |
| ACAAAGAATGGATGCGTGAGTTGGTCAGAGGTGCGTGTCG | 1 | 1.53513e-05 |
| ACAAAGAGGAGTTCCTAGTGTTTGTCCAAGTGACTGTCGC | 1 | 1.53513e-05 |
| ACAAAGAGGCACACGTATAAGTCATTTAAGATGTGGGCAA | 1 | 1.53513e-05 |
| ACAAAGATTCGGCCGATTCTTTAGGTCCACGGCCTGGTGG | 1 | 1.53513e-05 |
| ACAAAGATTTGTGGTGGGTCTTGAGAGAATCTACGACGAA | 1 | 1.53513e-05 |
| ACAAAGCACCAATTCTTGGTGGATCACAGATGTGTCGGCA | 1 | 1.53513e-05 |
| ACAAAGCGGCGAACAGTGCCTTAGCTCTGGGCAGTGGGGG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.