These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACACAACTGTGTCGGCGTGTGAGGGCACGTGGCGTGCGAC | 1 | 1.53513e-05 |
| ACACAAGAAGAGCTGGAGACGGCGTGACGCGTGTGCCCCG | 1 | 1.53513e-05 |
| ACACAAGTGGGGCTACATAGTCGGTGTGGTGGCTTGCGGT | 1 | 1.53513e-05 |
| ACACAAGTGTGTACAGTGGAAAGCCTGGGGGGACCAGTAT | 1 | 1.53513e-05 |
| ACACAATCTTGGACTTGGCTCCGTTCTGAATGGTAGCGGT | 1 | 1.53513e-05 |
| ACACAATGTTTAGCCCCCCGATGGGCGAGTGACTTGGTTA | 1 | 1.53513e-05 |
| ACACAATTGTTCAGGCAGGCGGGAGTCGCTAGGGTCTAGT | 1 | 1.53513e-05 |
| ACACACAACTTTCCCCGTGTTAGGAGGATGTGGATTGTAG | 1 | 1.53513e-05 |
| ACACACCACAGGATTGACCGTGGGGTCAGTATCGGCGTCG | 1 | 1.53513e-05 |
| ACACACCAGATTACAGATCACCATGAGGCATTCATTTTGA | 1 | 1.53513e-05 |
| ACACACCGCGATGAAATCACGGATTGCCCCGCGTCCGGGC | 1 | 1.53513e-05 |
| ACACACCTTGAGCGTGAAAATTATTCCCACTCAACACTGG | 1 | 1.53513e-05 |
| ACACACGACTCGCGTGTAAAGGGTGCGATAGGACAAGTGG | 1 | 1.53513e-05 |
| ACACACTCGGATAGGCCGTGGGGGGCGTTCGACCTTACTC | 1 | 1.53513e-05 |
| ACACACTCTTTCAAGGAAATAGATTGTTTCATGGCAGTAC | 1 | 1.53513e-05 |
| ACACACTGCATGCGGGAGTCAGGGGAACGGGATTAAGGTC | 1 | 1.53513e-05 |
| ACACACTGTCTGGAGTGGGTGCGCGCAGATCGGGGAGCCA | 2 | 3.07026e-05 |
| ACACAGACTGTGGAACGATGTGAAGGAATGGATTATTAGG | 1 | 1.53513e-05 |
| ACACAGATGTGCTAACGCGGTGTTGTTGAGGAAGACTGTT | 1 | 1.53513e-05 |
| ACACAGCACAAGGGGGGGGTGGCCCGCGTTTCGGCTAGGT | 1 | 1.53513e-05 |
| ACACAGCGTCCTGAGCCAATCACTCAGGGGAGCACTGAGG | 1 | 1.53513e-05 |
| ACACAGCGTGCAGTGAGGTCGTGGGATCGGCATCTCGTCT | 1 | 1.53513e-05 |
| ACACAGCGTGCTGTAAGGCGGTGGGCCACGGTAGGCTCCA | 1 | 1.53513e-05 |
| ACACAGCTAATGGAGTGTTAAGATCGAGCGTGAGTGGTAG | 1 | 1.53513e-05 |
| ACACAGCTCGCGATCTGCCTGTGGATGTGGAGTGTCATTC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.