These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACACATGGGCGTTCGGTGGCAGCAAGAAAGCCGTTTAGTG | 1 | 1.53513e-05 |
| ACACATGGTGCCACGGTCACGTGCGCGCCAGATAGGCTCA | 1 | 1.53513e-05 |
| ACACATGTGATGGAGTGTGCGTGGAGGGGTGCAGGACAGT | 1 | 1.53513e-05 |
| ACACATGTGTGGGATGTAAGTTCCCCGTGGGTGAATAAAA | 1 | 1.53513e-05 |
| ACACATGTTTTTGGGTCATCACTGGCCGGTATTGGATTGA | 1 | 1.53513e-05 |
| ACACATTAACGTGACGATCTCATAGTTGATGCGGCTGGTC | 1 | 1.53513e-05 |
| ACACATTCTATTTTTCCGTGATGTGCATATTATACTGGTA | 1 | 1.53513e-05 |
| ACACATTGAGGATCACAATGAAGTATTTTTGATTCTCGCG | 1 | 1.53513e-05 |
| ACACATTGGTGGGGGGCGCCTAGGTGTGGCACCACTGGAG | 1 | 1.53513e-05 |
| ACACATTTGTGTTTAAATGGGAGGCGGCGTCCGGTGTGAG | 1 | 1.53513e-05 |
| ACACATTTGTTGGTCTACGCTCTGGTGCGGTGGTCTGTGT | 1 | 1.53513e-05 |
| ACACATTTTGTATGAGATTTTTCTGGTAAGGTGACCGTGG | 1 | 1.53513e-05 |
| ACACCAAAGTAAAGTCACGGCTGAGATGGATGTGAGGTCC | 1 | 1.53513e-05 |
| ACACCAATTTAAGGTTTTATACGCGCAACGGGACAATACA | 1 | 1.53513e-05 |
| ACACCACGCATGAAAGTACAGTGGAAATACGGCTACGACT | 1 | 1.53513e-05 |
| ACACCACGGATCGTCTGCGTCGGGGGTCGGAAGGACGTCA | 1 | 1.53513e-05 |
| ACACCACGTGCCGCGCGTGCGAGCCGTGGGCCGAGTCTGA | 1 | 1.53513e-05 |
| ACACCACTGTGGGTCGGTTCTGAGTCCTGTTTGAGGAGAA | 1 | 1.53513e-05 |
| ACACCAGAAGACCATGCGAGTTCGTGTAAATGTGAGGCCG | 1 | 1.53513e-05 |
| ACACCAGACTGCGCGCACCAGGCCCCACCGAGGTTGGGCT | 1 | 1.53513e-05 |
| ACACCAGGACCTTTCTCGCTATATCGAGTGCGTGGGGGTC | 1 | 1.53513e-05 |
| ACACCAGTCAAGTGATCTGAGAACGGATTTTCCGCGTTCG | 1 | 1.53513e-05 |
| ACACCAGTTGACGCGGGGTGGAAGTGGAGGGTGGCTTCCC | 1 | 1.53513e-05 |
| ACACCATACGTAGGTTGTGAATATTGGATTTGAGCGATTT | 1 | 1.53513e-05 |
| ACACCATCTAGCACCGTAAAGCTTTGTTACCCATGGCGAA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.