These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACACGTGATGCAGGCTCTAGTTTGAGCATATGCACGAGGG | 1 | 1.53513e-05 |
| ACACGTGCGTATCAGTAACGGGGCAGTCTAGAGGGGTACC | 1 | 1.53513e-05 |
| ACACGTGGATACGTCGAATGTGAGAGTAGTTGACTTCTTT | 1 | 1.53513e-05 |
| ACACGTGGCAAAGATGACGCTTGAGTGGGGGTGTATTCGG | 1 | 1.53513e-05 |
| ACACGTGGCACCTTCGTATGCACAGTGTGATGTAATAATG | 1 | 1.53513e-05 |
| ACACGTGGCAGCAGTCTCCTCGGTCAGCTGGCGACACTGT | 1 | 1.53513e-05 |
| ACACGTGGGCGGGATGATAAATTTGGCGGCGTGGAGGGTT | 1 | 1.53513e-05 |
| ACACGTGGGGGGAAGTGTACGGAGGTGTAGTATTGCGATG | 1 | 1.53513e-05 |
| ACACGTGGGGGGCCAGCACGCTTCGAATGTGGATTTGACG | 1 | 1.53513e-05 |
| ACACGTGTACGTCCGAACTGTGCGCGTTAAGTGACTGTGA | 1 | 1.53513e-05 |
| ACACGTGTAGTGCGCGGGATTGGCGCTTCTAACGTAGGCG | 1 | 1.53513e-05 |
| ACACGTGTCGTAGTTCACTCGGGGACGAAACTAATTGCAG | 1 | 1.53513e-05 |
| ACACGTGTGATCCTGGGTTTGGGAGTGAGCAGGGTCGTGA | 1 | 1.53513e-05 |
| ACACGTTACTGGCGTGGGGGCAGAGTTTTGCATCCGTGTT | 1 | 1.53513e-05 |
| ACACGTTAGGCGACAGGCCTTCCACAGGTGTGGAGTAAAA | 1 | 1.53513e-05 |
| ACACGTTAGTAGTGTTTCTGTGGTCATTGACTGGGTGAGA | 1 | 1.53513e-05 |
| ACACGTTCTCTTGCCGGCAGGTATGTGATTCGAGTGGTCA | 1 | 1.53513e-05 |
| ACACGTTGCTTGAGTGTCATTTGCAGTGTAATTTGACTGT | 1 | 1.53513e-05 |
| ACACGTTGTATCGTGGGAGTCCCTTTATTATCCGGTCATC | 1 | 1.53513e-05 |
| ACACGTTTTGGTGGGACATGGTTCCCGCTGCGCGTGGCAT | 1 | 1.53513e-05 |
| ACACTAAACCAGTAGGTTGTCACAGTGGGTGGAGTGATAA | 1 | 1.53513e-05 |
| ACACTAAGATACCGGGTCTTAGTGAAAACGTATAGTCGGT | 1 | 1.53513e-05 |
| ACACTAAGGGCATGGGGGTCAGGTTTGTTCGGAAAGCGGC | 1 | 1.53513e-05 |
| ACACTAAGGTTGATTTCGTCAAGTGTCAGGTTATAAGAGA | 1 | 1.53513e-05 |
| ACACTAAGTAGGTGAGGGGTTGGAACCACCAGTGGGTGTA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.