These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGAATAAAGTACCCGCACCGGTGGCGCTGTAACGGGGT | 1 | 1.53513e-05 |
| ACAGAATAGTGTGCTATGGGAACGTGTACATTTCAGTGTT | 1 | 1.53513e-05 |
| ACAGAATCAATGGTCGGTGGTGGGCGATTCACTGGTTGGA | 1 | 1.53513e-05 |
| ACAGAATGACTTGTAATGCACACTGGTGGGGTAGGGTAGG | 1 | 1.53513e-05 |
| ACAGAATGCGCGAGATGCGCGTGCACCCGGTCGCGTGGAA | 1 | 1.53513e-05 |
| ACAGAATGGATGATTCGTACAGGGACTGAGGATGTGGGGT | 1 | 1.53513e-05 |
| ACAGAATGTAAATTGCCGTATTATCACGGGTTGCAGGGGG | 1 | 1.53513e-05 |
| ACAGAATTCGGACAACGCGGTTTCGCGACCTAGCGCGCCA | 1 | 1.53513e-05 |
| ACAGAATTTGTCGTGCTTTTTGGCCCGTGGGATTAACGCC | 1 | 1.53513e-05 |
| ACAGAATTTTGAGCGGTACGCCCTGATACAGTCCGGGCAG | 1 | 1.53513e-05 |
| ACAGACAAACATTGAAAGGAGTGGAATGTTCGGAGGGTCG | 1 | 1.53513e-05 |
| ACAGACAAGGGGTGCGTATGTGGGCTGGCCGGGGTGGAAG | 1 | 1.53513e-05 |
| ACAGACACCCTGTTAGTCCACAATTGGTGCGAGTTCCCCA | 1 | 1.53513e-05 |
| ACAGACAGACGACGGTGTCAGACGGAGTTCGTGCGGGATT | 1 | 1.53513e-05 |
| ACAGACAGTATCGTGGAGTTCAGGGTAGTTGTACACCACG | 1 | 1.53513e-05 |
| ACAGACATACCACACGCTCCTCTGGACCACGATAAGGAGT | 1 | 1.53513e-05 |
| ACAGACATAGCACGCGGAGACTGTGTCGCCGGGGTGAGTG | 1 | 1.53513e-05 |
| ACAGACATTCGGTATCGTGGGGGGGGAGGCGACCCCGACT | 1 | 1.53513e-05 |
| ACAGACCAAATTTCACGCGCGCAGGGGCCGAAAAGGCTTG | 1 | 1.53513e-05 |
| ACAGACCACACCTCGAGTTTGTGGCTGGGGAAGACTGTAC | 1 | 1.53513e-05 |
| ACAGACCACGAGAATGGGGGTTCGATGGGTCGGCACGAGA | 1 | 1.53513e-05 |
| ACAGACCTCAGTCGTGTAATCAGGAACGTGGATGGTCACG | 1 | 1.53513e-05 |
| ACAGACCTTATAATTGTATGTCTGGTAAAGGGAGGCTGGT | 1 | 1.53513e-05 |
| ACAGACGAACAGTGGGTCATCCTGTGGCGCGGGCGGCGGT | 1 | 1.53513e-05 |
| ACAGACGAGGGCCCGTTGCGTGGTGTGCTTGCATGCTTGG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.