These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGCTGTGTACATTCTGTCCTGATGGGCCAAGTAGTCTT | 1 | 1.53513e-05 |
| ACAGCTGTTCCGTGGGGCACCAAGTATTCGCGTGTATCTG | 1 | 1.53513e-05 |
| ACAGCTTCCCACGTGACTAGTGGGATCTCGTGACAGTGGG | 1 | 1.53513e-05 |
| ACAGCTTCCGCCCGACGGAGTAACGAGACGTGGGAGTGGA | 1 | 1.53513e-05 |
| ACAGCTTGATGGGAGGTGCTGGTAGGGGATACTGAAGCAG | 1 | 1.53513e-05 |
| ACAGCTTTCAGGACTTGTGTTTTAATTTTGGGTTTCCGCG | 1 | 1.53513e-05 |
| ACAGGAAATGTTGGCCGTCCACGGTGCTAAGTGGGGGGGT | 1 | 1.53513e-05 |
| ACAGGAAGATCGGAAGCCTTCAGAGAAGGAACCTGTATAG | 1 | 1.53513e-05 |
| ACAGGAAGGGAGGCGCGTTGCGGCCCCAGTGGATTCTTCG | 2 | 3.07026e-05 |
| ACAGGAATAATCACGCGGGTTTCATGAGGGCCTTGATTGA | 1 | 1.53513e-05 |
| ACAGGAATTAAGGGCGCGCGATTTGTCTGGGCGGCTGAGC | 1 | 1.53513e-05 |
| ACAGGAATTAGGTTGCCGTTTGTGTTCCGTGATTGCAAAA | 1 | 1.53513e-05 |
| ACAGGACCGAGTGGATCACGGGACGTGTTGGTATGTCAGA | 1 | 1.53513e-05 |
| ACAGGACCGCCGGGTAGCGGGGTTCTCGTGGGGTTTCGGG | 1 | 1.53513e-05 |
| ACAGGACCTCGGTGGGCTTGCCCAGAAGTGGATCTCGACT | 1 | 1.53513e-05 |
| ACAGGACTTATCCACCTTCGGAAGGAGGGAGGGCGGTAGA | 1 | 1.53513e-05 |
| ACAGGAGAAAGAGTCAGTTGTGTTTTCACGAACTTCAGTT | 1 | 1.53513e-05 |
| ACAGGAGGCGGTGTGGATAGATCTAGCTAGGTGATCTCCG | 1 | 1.53513e-05 |
| ACAGGAGGGTCGGAGTGTGCTGGTGAACGGGGAGCCGCGA | 1 | 1.53513e-05 |
| ACAGGAGGGTGGTCACTGTGGAGGAGGCGTGGGAGGCAGG | 1 | 1.53513e-05 |
| ACAGGAGGTACAAATGGAATCCCGTATTAGCTGCGGGGGG | 1 | 1.53513e-05 |
| ACAGGAGGTGCTGTGAGCTAGTTCCTATGAGCTTGGGGAA | 1 | 1.53513e-05 |
| ACAGGAGGTGGAGTCAAGAGAACACTCATATCGCGCGAGG | 1 | 1.53513e-05 |
| ACAGGAGGTGGGTGGACGTGTCCATGGCGTGTCAGCCGCC | 1 | 1.53513e-05 |
| ACAGGAGTAAGGGAAGTCACTTGGATTGATTGAGAGCGTG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.