These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGGTTTTGTCTGGCCCTCTGGGTCCCTCCGAGGGGGCA | 1 | 1.53513e-05 |
| AAAGTAAAAGTTGCGTGGGAAGGCCAGGTGGCAGGACGGC | 1 | 1.53513e-05 |
| AAAGTACGTGGACTCAATTGTGGGATCTTCATGAAGGCGC | 1 | 1.53513e-05 |
| AAAGTAGAATGAGGTGAATCTGCGAGCAATTTCCACGTCC | 1 | 1.53513e-05 |
| AAAGTAGGGGAAATTCCCCATTAGGTAGACTCTTGTTGAT | 1 | 1.53513e-05 |
| AAAGTAGGGGGAATAGCACTTCAACAATGTTGCAAGGGTG | 1 | 1.53513e-05 |
| AAAGTAGGTCGCCGTAGTATAGGAGGCCAGGATATAGTAC | 1 | 1.53513e-05 |
| AAAGTAGGTGTGAGGTGTGGGTAAATTGAGTGCGCCTGAG | 1 | 1.53513e-05 |
| AAAGTATACCAAGCGTGACCTTGGCGACGGGCAAAGAATG | 1 | 1.53513e-05 |
| AAAGTATGTGGTCCCGTGTGCGGGTGCGTGTTTGGAGGCA | 1 | 1.53513e-05 |
| AAAGTCAAGTCTCCACGTGCCGGTTCGTGTCGATGTCAAA | 1 | 1.53513e-05 |
| AAAGTCACGTGCCCAGTGGCATTCTAGTGGTTACGAGCGG | 1 | 1.53513e-05 |
| AAAGTCAGAGTGTAGTGAGAACCAAAGTGCGTGGTTACTT | 1 | 1.53513e-05 |
| AAAGTCAGGATCGGACTTCCAGATGCCACCGTAAGAGCGA | 1 | 1.53513e-05 |
| AAAGTCCAAAATTTGAGATGTGATCGGCCCCGTAAGCGCC | 1 | 1.53513e-05 |
| AAAGTCCAGGATGCCTGTGCGGTTGCGTGGATGGAAAGTT | 1 | 1.53513e-05 |
| AAAGTCCCACGATCTGGCGCGTCCAGTGGGGCATGAGGGG | 1 | 1.53513e-05 |
| AAAGTCCGTAGACTCGAGGTGCCCCGTGTTGGGGAATGTT | 2 | 3.07026e-05 |
| AAAGTCGAGACTAGGGGGATCCTATGGAGGTTTAGGTTAG | 1 | 1.53513e-05 |
| AAAGTCGATCGTGGTGGTAGAGCCCATCGGCGTGGGGCGT | 1 | 1.53513e-05 |
| AAAGTCGCTACCGCAGCCTATGGAGCAAGGGTTGGCGCAA | 1 | 1.53513e-05 |
| AAAGTCGGAGCGTTCACGAAATGCAGGGTGAAATACTATG | 1 | 1.53513e-05 |
| AAAGTCGGTGCCGCGCACCAGGCTTGTGCGTGTCAAGCGT | 1 | 1.53513e-05 |
| AAAGTCGTGTCGGTTGGGGTGCTGCGCTGTGGACGCGTGC | 1 | 1.53513e-05 |
| AAAGTCTCGACAGGAGAATGAGGGTTCGTAGTGGGGGTAG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.