These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGGTGTTGTTCGTACAAGATGTTTCCAATCCACGAACA | 1 | 1.53513e-05 |
| ACAGGTGTTTGGGGTATGAAGCTCAGTTACGGAGGTTCAA | 1 | 1.53513e-05 |
| ACAGGTTACGTGGAGAGTTGAGTGTTTTTTAATACTGCAT | 1 | 1.53513e-05 |
| ACAGGTTATGCTGGGGTGACAGTATGGTCGCTGGGTACAG | 1 | 1.53513e-05 |
| ACAGGTTATGGTCCCATGTGGAAGATTGAAGGATAAGAGA | 1 | 1.53513e-05 |
| ACAGGTTCACGGGAGGGGTTTGGTAGGGAGCCAATGGCCT | 1 | 1.53513e-05 |
| ACAGGTTGTCAAGTTTAGCAGGGCGTGGGAGGGGCCGTGG | 1 | 1.53513e-05 |
| ACAGGTTTCTGGGTGTGGGCAGGGCAATATCCGGGCCCCG | 1 | 1.53513e-05 |
| ACAGGTTTGCGTTCGGAAGGGCAGGTTGTCGTGAGCGTGG | 1 | 1.53513e-05 |
| ACAGTAAACAGTGGGCCAAGTGGCAGGAGAGATACGGTGT | 2 | 3.07026e-05 |
| ACAGTAAAGTCCCTGCAGTGTGTTGCTGTGGGGGTGGGGG | 1 | 1.53513e-05 |
| ACAGTAAATGGGTATGGTTACAGCGCGGTCACAGTACGAC | 1 | 1.53513e-05 |
| ACAGTAACAGTCACGAAAGGTAAGATGCGGCGCTATGGGG | 1 | 1.53513e-05 |
| ACAGTAACTAAGGTTTCTGGAGAGGATCATAATAATCTGG | 1 | 1.53513e-05 |
| ACAGTAACTAGCCAATACCCTGTGGAAACTATGGGAGGTT | 1 | 1.53513e-05 |
| ACAGTAACTTTTTAGATTAAAGGATGTCCTGGTGTGAGGA | 1 | 1.53513e-05 |
| ACAGTAAGCAGTGCGCGCGATTACGATAGCTTATGCACGC | 2 | 3.07026e-05 |
| ACAGTAAGTGCTAGAGAGTGGACGGGAAGATTCACGCGCG | 1 | 1.53513e-05 |
| ACAGTAAGTTGGGTGTGGTGTGGGCCGCGCATGATCAGCT | 1 | 1.53513e-05 |
| ACAGTAATCAGAGTGGAAACTTAGGCTTCCCGTTGAGAGG | 1 | 1.53513e-05 |
| ACAGTAATGGGTCCCCTGTCGTGATTGGCTGCAACCGAAG | 1 | 1.53513e-05 |
| ACAGTAATTCCGCAGGTACGAGCTCCCACATTTGGGGGTT | 1 | 1.53513e-05 |
| ACAGTAATTCCTCCTTAAAATGCAGGTAAGATAGTTGTGC | 1 | 1.53513e-05 |
| ACAGTACGTCCATAGTAGACAAGCCGTACAGCCTCACATG | 1 | 1.53513e-05 |
| ACAGTACGTTTTGAGTCCTGCCGTGCCTGGTCTTCGTGCG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.