These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACATCAGTCGTGCACCGTGGGCAAGGGGCATCATGACGTA | 1 | 1.53513e-05 |
| ACATCATATTTGTGGACCCGTTTACCGCGCTAGTGGTGAT | 1 | 1.53513e-05 |
| ACATCATGAATGACAGTGGATTTCGGATGATGAGACGTGA | 1 | 1.53513e-05 |
| ACATCATGCGTGTGATTGCTTGTTGGCGTTGGTCGGTCTG | 1 | 1.53513e-05 |
| ACATCATGTGGAAGTTCGTCACGTTCGGCACACTAGGAGA | 1 | 1.53513e-05 |
| ACATCATTCGGGTATATCGTGGGTGTGCGGTAATCCTGCC | 1 | 1.53513e-05 |
| ACATCATTGTGGAATGCGGGGCGGCGGCCACAAGTCGGCC | 1 | 1.53513e-05 |
| ACATCATTTTGGTCGTGACGCTCGATCCATGTTAGACTTC | 1 | 1.53513e-05 |
| ACATCCAAGGAGCCTGGGGGCGGGCCAGTGGGAGCGTACG | 1 | 1.53513e-05 |
| ACATCCACGGCTATTGGAAGGGGGATACGTGGATGGTCGT | 1 | 1.53513e-05 |
| ACATCCAGGTGTGGAGCATGCGTATATCGGATTCGTGGAT | 1 | 1.53513e-05 |
| ACATCCATCCTATGAACATATGCCATCAATTAGCGCCAGG | 1 | 1.53513e-05 |
| ACATCCCCGAGGGCCCGGAGAGTGCGCCGGATGCACTTCC | 1 | 1.53513e-05 |
| ACATCCCTCAGGGGTCCATAGCTGCCTGACGTGGGGAATT | 1 | 1.53513e-05 |
| ACATCCGGGCTGGTCTGGGTGCAATTGAGCTCGCGGGCTG | 1 | 1.53513e-05 |
| ACATCCTAGGTGTAGAGGCTGTGAGCCGCGTGTGTGGGAG | 1 | 1.53513e-05 |
| ACATCCTTAGAGTTTGACTCTGAGCTAAGGTCTGTGCATC | 1 | 1.53513e-05 |
| ACATCGAAAAGATTGAGAGGACTCGACGCCCAGCCTACTT | 2 | 3.07026e-05 |
| ACATCGACTAAGCAGTGGGGGATCCACCGGATATCGGTAT | 1 | 1.53513e-05 |
| ACATCGAGTGCTGGCAATACAACGCGAGGATGTAAGACTA | 1 | 1.53513e-05 |
| ACATCGATAGCGTTGAACGAGGATGCCGAGGTCTATGCGG | 1 | 1.53513e-05 |
| ACATCGATGCCCTTCGAATGCGTTCTCTGTAGGTCGGCGT | 1 | 1.53513e-05 |
| ACATCGATTAGCCTTCTATTCCTAACTGGGCTGTAGACCG | 1 | 1.53513e-05 |
| ACATCGCGCGGCCCGTGCAGGCGCCCCATCCACGCCGGAA | 1 | 1.53513e-05 |
| ACATCGCGGCCGCGAGGTGTGGATTGTGATTTTCAAGTCT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.