These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACCGTGACGTTGCATGTAGCATTTTTTAGTTGCAGTGTGA | 1 | 1.53513e-05 |
| ACCGTGACTGAGGCTTCGAGTCATCGGGGATGGAGTGGAG | 1 | 1.53513e-05 |
| ACCGTGACTTTAGCATCCTCCGGGTTTAGCCGAAGAGAAA | 1 | 1.53513e-05 |
| ACCGTGATGTGCGGCTGGGGGTCTCGGATTTGGGGTAATA | 1 | 1.53513e-05 |
| ACCGTGCAGAGGCTGCCAGAACAACATGGTTGCAAGAGTT | 1 | 1.53513e-05 |
| ACCGTGCATGACATGCCCAGCTGTTGGCTGTGGGCCGTTA | 1 | 1.53513e-05 |
| ACCGTGCCTACTCGCGCTGAGGGGCCACGTCGAGTGGACA | 1 | 1.53513e-05 |
| ACCGTGCCTGGGACGCCGGTTTCACCGACTTTGAGATAGT | 1 | 1.53513e-05 |
| ACCGTGGAACGGTCGTGGCCATTGTGATGAGTGAACGTCT | 1 | 1.53513e-05 |
| ACCGTGGACTCCGCGGTGGGACATTGCTCCGTCCGAGATA | 1 | 1.53513e-05 |
| ACCGTGGAGAAGCTGTCCATAAGCAGCCTCCTATTTCTCG | 1 | 1.53513e-05 |
| ACCGTGGAGTAGTGTGGAGGAGAGCCCGAGGTGCTATGAG | 1 | 1.53513e-05 |
| ACCGTGGAGTGGGCAGCAGATGATAGGTTTGTTCTCCGGT | 1 | 1.53513e-05 |
| ACCGTGGATTTGGGTCGTGGTTTGTGGTCTTTAGTTAGGC | 1 | 1.53513e-05 |
| ACCGTGGCACTGTCTCGTGGTGCAAACGGCTGCATAGTGG | 1 | 1.53513e-05 |
| ACCGTGGCCGCGCTAAACCGTGGCGTAGGAGCGCTGTACG | 1 | 1.53513e-05 |
| ACCGTGGCGTTCAGGTGCGGGGAAAACGAATGGCGTCAAC | 1 | 1.53513e-05 |
| ACCGTGGGAGTGTGGAGGAGTATGGTAAACAAGGTAAGGG | 1 | 1.53513e-05 |
| ACCGTGGGATAGTCGAGACAGACCGCGCGGAGGTTCGATA | 1 | 1.53513e-05 |
| ACCGTGGGATTAAAGGTCGTGGGCACTTGCGATTGTCCAA | 1 | 1.53513e-05 |
| ACCGTGGGCCGAGGGCTTCTGCTGTGCGGGGGTTGTCTCG | 1 | 1.53513e-05 |
| ACCGTGGGCGGGTAGGCCTCGCGAGAATAGCGCGTCTTGC | 1 | 1.53513e-05 |
| ACCGTGGGCTAATCGGTTCTCGTCTGGTGAATTGTACATA | 1 | 1.53513e-05 |
| ACCGTGGGGGGAGGGCACATGGTCGGTTACGTGGAAGCTG | 1 | 1.53513e-05 |
| ACCGTGGGGTGAATCTACGTGGGCATACATGACAGTCTGT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.