These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATATCAGCCACTCGGGCGACGGGATAATTGCACTTGAG | 1 | 1.53513e-05 |
| AAATATCGTGCGCAATAAGAATTGTAGTGATTTAAACGGG | 1 | 1.53513e-05 |
| AAATATGAACGCAATGCAGGAGCCAACGTGGGGTGCGTGG | 1 | 1.53513e-05 |
| AAATATGTGCCCGGGGGGCGTGTCTACGGGGTTGAAGCTC | 1 | 1.53513e-05 |
| AAATATTAGGGGAGTTTATGTTCTAGACAGTGGTCGTAGT | 1 | 1.53513e-05 |
| AAATATTATGCGCGTGATACATTCGTATGTAAGAGTCAAG | 1 | 1.53513e-05 |
| AAATATTCACTGGCGCTTTACACCGAAGTGTAGGAGGGAT | 2 | 3.07026e-05 |
| AAATCACCGGGCGGTATGAGTGCGTTGGCTTGAGGTTATG | 1 | 1.53513e-05 |
| AAATCACCTGGGTGCGATATAGGGTTCTATGGTTGGTGAC | 1 | 1.53513e-05 |
| AAATCACGTACGCCATTTCTTACTTACGATCAGTTAAGAG | 1 | 1.53513e-05 |
| AAATCACTAGTGGGTGAATTCAGCTCGGTGGCTGCTAGGG | 1 | 1.53513e-05 |
| AAATCAGAGCCGGGTAAGGCGTAAAAGGCCAGCGAGCGGT | 1 | 1.53513e-05 |
| AAATCATGGTGCGTAGTGACCGAGACGTGGCAGGTCGGAG | 1 | 1.53513e-05 |
| AAATCATGTAGATGTACATGCAGTTGGTCCATAACCGCTG | 1 | 1.53513e-05 |
| AAATCCATAGGAAGGGTCACGGATATAGTGCCTGATTAAC | 1 | 1.53513e-05 |
| AAATCCCACGAGCGTAGCGTGCATAGTGTACGGAGCTTTG | 1 | 1.53513e-05 |
| AAATCCCCGAGTGGCGTGGGGGTAGGTATTAGTTTGAAGT | 1 | 1.53513e-05 |
| AAATCCCGGATATCAGGTTGGCTGGAGTCTTGATGTCCTT | 1 | 1.53513e-05 |
| AAATCCCTAGGTTACAGGGTGCTTCTAGGGGGAGTGGGGG | 1 | 1.53513e-05 |
| AAATCCGACGCAGCTCGGCATTACGAGATGTGTCTGTGGG | 1 | 1.53513e-05 |
| AAATCCGCAGCTGTGGGTCTGTGGAGTGACATTTCGATGA | 2 | 3.07026e-05 |
| AAATCCGGGCGCTCAACTGTGTTGCAGGAGGGGATGGTGG | 1 | 1.53513e-05 |
| AAATCCGTTGGCTTACGTGGAATCACGGGAACGCTCGATT | 1 | 1.53513e-05 |
| AAATCCTAGAATTGAGGGACGTAGGTTGTGTCTGTTCAGA | 1 | 1.53513e-05 |
| AAATCCTCACTCTCCTTGAGGTCGGTATTAAAATTGAAGT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.