These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACACACGGGTGTTCGGAGCCCGATCACAAGATGGTGCGT | 1 | 1.53513e-05 |
| AACACAGCGTTGCGGGCCTTTGTTTATATATGAGAAATCG | 1 | 1.53513e-05 |
| AACACAGGATATAGTCTGATGTCTGTCTTGGTAACAGCGT | 1 | 1.53513e-05 |
| AACACAGGGGAGGTGAAGAGGCCGTAAGTGTGCCGTGTCG | 1 | 1.53513e-05 |
| AACACAGTTTGCCGATAGCGTGTCCTACGCAGCTTACTTG | 1 | 1.53513e-05 |
| AACACATTATAAATCAGTGCAAGCAATGTTGTGATCGACC | 1 | 1.53513e-05 |
| AACACCGAGTCTCTACGAAAAGGTCGTTAATCACGGCATA | 2 | 3.07026e-05 |
| AACACCGCTCCATAGGGGCTATTAAGTGGACGAGATGGGA | 1 | 1.53513e-05 |
| AACACCGGAATCACGTGGGGTGCTCAGGTGGAGGGATCCA | 1 | 1.53513e-05 |
| AACACCTATATGGATTGGTGTGTAGTAACTTTGTGCGTCG | 1 | 1.53513e-05 |
| AACACGAAAAACGTGTGATACCGTGGTCGTGGTCAGGGAA | 1 | 1.53513e-05 |
| AACACGAGTGAATCTGCTCTGGCGCACGAGTATCGCTATC | 1 | 1.53513e-05 |
| AACACGATTGAGTTATAAGCGTGCGTGGATAATTGCCACT | 1 | 1.53513e-05 |
| AACACGCAAGGAGTCGAATGGTTACAGAACTGTGTGACAG | 1 | 1.53513e-05 |
| AACACGCAGCAGTGGGTGACACGGATTCGGGTGTACCGGG | 1 | 1.53513e-05 |
| AACACGGATGTCTGTGAAGTGGGCATTTTGAGTTTGACGC | 1 | 1.53513e-05 |
| AACACGGGCCGTACACGTCGCTGATTAGTCGCGGGGTGCG | 1 | 1.53513e-05 |
| AACACGGTATGAAACATTCATGATTACACAGCAGATGGGC | 1 | 1.53513e-05 |
| AACACGGTGGGGGATACGGAAGCAATCCGTGGCTTTGCGA | 1 | 1.53513e-05 |
| AACACGGTTCAGGAGTGAAGAGAAAGCAGCCCACTAATGA | 1 | 1.53513e-05 |
| AACACGTCGGTGCTGTTAGTAGAGTGGGGAGCGGGAACGT | 1 | 1.53513e-05 |
| AACACGTGGGGCCCGTACATGGGAGGGACACGCGAGATAT | 1 | 1.53513e-05 |
| AACACGTGTGTATGTAGACGCGGCTTTCTGGTGGGTTAAA | 1 | 1.53513e-05 |
| AACACTATAGCCGTGTGCGCAAAGGCGTAAAGCGGCGCGA | 1 | 1.53513e-05 |
| AACACTATGCGTGGAAGAGAGCGGCACTAGACGAGTGTGA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.