These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGCGTATAGATATTGTCAGTCCGGTGGAGCATGCTCGA | 1 | 1.53513e-05 |
| AACGCGTGGAAACACGGGGCATGTATCGAAGGGTGTCGGG | 1 | 1.53513e-05 |
| AACGCGTGGAGTGGTCTGACCGATGGGTGTGGATCGGTGG | 1 | 1.53513e-05 |
| AACGCGTGGCGTGACGCGTGGGACGCTAAACCAGCTTGGT | 1 | 1.53513e-05 |
| AACGCGTGGGAAAGGGAACGTGTTTAAAATATCGTTGGGT | 1 | 1.53513e-05 |
| AACGCGTGGGTGCAGTTCGTCGTGGTCCGTTGGCTGAAGT | 1 | 1.53513e-05 |
| AACGCGTGGTATGGTGCTGATCACGATCTATAGTGGGGTG | 1 | 1.53513e-05 |
| AACGCTAAACGCCTTTTACAAGGTGGGATTTAGAGATGTG | 1 | 1.53513e-05 |
| AACGCTACGTGGTCCGTTGTCGTGGAACACGTACTGGCGG | 1 | 1.53513e-05 |
| AACGCTCGTGTGGCACATAAACGTAGTAGCTGCCACGTCA | 1 | 1.53513e-05 |
| AACGCTCTGGTCCGCGCAATGTGGTGTAGAATCCGTGGGC | 1 | 1.53513e-05 |
| AACGCTGAAGAGGTATGGTGTGGGGTAATACAGATGATAT | 1 | 1.53513e-05 |
| AACGCTTAATGAGCACGGGATCGGCCGAGTCGCCCAGTGA | 1 | 1.53513e-05 |
| AACGCTTAGAAGTGGGGTCGCAATGTCTCGAGGTCGTGGA | 1 | 1.53513e-05 |
| AACGCTTATGTGTGGACTAGCGGGCTGGGGCGTAACACAT | 1 | 1.53513e-05 |
| AACGCTTGCGGTCGAAAGGTAAGGTGTGGGCTTTTCTCAG | 1 | 1.53513e-05 |
| AACGCTTGTTTGCTAGGGTGACTGATGACTCGCGCTCTTC | 1 | 1.53513e-05 |
| AACGCTTTAAGGTATATGCCTGTATGCGCCAAGTGGCCAT | 1 | 1.53513e-05 |
| AACGGAAACGTAGTACTAGGATATGTCTGCTGTGCATGGG | 1 | 1.53513e-05 |
| AACGGAAGACAATCGTTTATGTTCTCGAAGGCGTGTGCGT | 1 | 1.53513e-05 |
| AACGGAAGACGAGAGAAGTAAGGCAGGGGGTACGAGGTCG | 1 | 1.53513e-05 |
| AACGGACATAGCCGTGGTGATATCATGAGGTGAGGAGCTG | 1 | 1.53513e-05 |
| AACGGACGAGGTCTGCGTGGATTGCGCCGGGTTTAAGGTC | 1 | 1.53513e-05 |
| AACGGACGCGGGGCGTGGCCGGACCCTTGCGCTGCACCCT | 1 | 1.53513e-05 |
| AACGGATCGAAGTGACCACGTGGTAACGGAGATAGACTCG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.