These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGTGGGCCGTGGGGTGGATCCACTAGAAGCTTGAGTCA | 1 | 1.53513e-05 |
| AACGTGGGGAGACGCGAAGTGGTGAATCGGTGCGGATGTA | 1 | 1.53513e-05 |
| AACGTGGGGAGTGAACACGCTGTTGCTACAGAGTGGGGGA | 2 | 3.07026e-05 |
| AACGTGGGTCAGCGTGCGTTGACCTTTGGTATCTCGTGGG | 1 | 1.53513e-05 |
| AACGTGGGTGAGCTGTGGCGGTGAGTGTACCCGAGCTTCC | 1 | 1.53513e-05 |
| AACGTGGGTGGTCTATGGCGTGTGCTTGGTTGCGAACCTT | 1 | 1.53513e-05 |
| AACGTGGTGATGCTGGTTAGTGATACATTGTGGATCTGCT | 1 | 1.53513e-05 |
| AACGTGTATCCGCGAGTGCGGCAAGGTCGCAGGTCGGAGT | 1 | 1.53513e-05 |
| AACGTGTCGCTGTTTGGCAAGTAGTGGATATGGGAGCGTC | 1 | 1.53513e-05 |
| AACGTGTGGGGGAATGTACGTCACGTGGGTTTTCCCGTGT | 1 | 1.53513e-05 |
| AACGTGTGTCTGTTCGCAGTTGCGTGACGGGCTTGGTGCT | 1 | 1.53513e-05 |
| AACGTGTTTCGAGTGGGACTCGTGGGGTAAGCCGGCATTA | 1 | 1.53513e-05 |
| AACGTTAAGTGGTCACGTTTAATTCTGGGGAAAGAGTTCG | 1 | 1.53513e-05 |
| AACGTTATCTGCGTAGGCAGGAGTGAGTGGAAGGAGTGGG | 1 | 1.53513e-05 |
| AACGTTCATGAATCGTCGCATGCGGCCGTGCGGTCGTGTG | 1 | 1.53513e-05 |
| AACGTTCCATTCGTGGGACCGCTCTGTGAGGTAGTAAGGT | 1 | 1.53513e-05 |
| AACGTTGCCGGTTTATGCACCCGTGGATTTTGGCCTCGTC | 1 | 1.53513e-05 |
| AACGTTGTCGTGGTAATGTCACGTGGCAATGGTCGCTGTG | 1 | 1.53513e-05 |
| AACGTTTACCACTGTGTACTTGACACAGGGTCCGATCAAG | 1 | 1.53513e-05 |
| AACGTTTAGGTCTTTATGTGCGTGGGGCGCGATGTGGACT | 1 | 1.53513e-05 |
| AACGTTTATTCGAGGATCCTGGGGTTGCTTGGAGTGCTCA | 1 | 1.53513e-05 |
| AACGTTTTGGCGTGTCGCGTGTTTTATCAGCGGAGCTCGT | 1 | 1.53513e-05 |
| AACGTTTTGTAATTACACGGTCTGTCGTCTTACGTGATTC | 1 | 1.53513e-05 |
| AACGTTTTTTGGTCGATAGAGATGGCGGACCTATTCTAGT | 1 | 1.53513e-05 |
| AACTAAAAGGTCGAAAGGTTGGTTTTAATAATGTGGCGAT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.