P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972348

RV03_s

Reads
4,209,364
Distinct strings in file
4,192,326
File size
25.6 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972348
Sample:
SAMEA13183931
SHA-256
2da3356df89731fe948748d34a65806c63a9a10c045386dd54b1c42266a37efc

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAATCGACGATCTCCAAC12.37566e-07
AAAAAATCGACTCATGTGAAA12.37566e-07
AAAAAATCGAGTACTACTCTA12.37566e-07
AAAAAATCGATACAAACTCAA12.37566e-07
AAAAAATCGATAGATACGACG12.37566e-07
AAAAAATCGATAGGATAATCG12.37566e-07
AAAAAATCGATATTGCTTTTT12.37566e-07
AAAAAATCGATCATATAATAT12.37566e-07
AAAAAATCGATCCTTCAACTA12.37566e-07
AAAAAATCGATCGTCTGACCG12.37566e-07
AAAAAATCGATCTATTGTCGA12.37566e-07
AAAAAATCGATCTCTAGGTCC12.37566e-07
AAAAAATCGATCTTTCTCGGG12.37566e-07
AAAAAATCGATTTGCCGACGC12.37566e-07
AAAAAATCGCGCAGATACTCG12.37566e-07
AAAAAATCGCGTGAAATTCGC12.37566e-07
AAAAAATCGCTACCCTTCCTA12.37566e-07
AAAAAATCGCTCAATTCATAA12.37566e-07
AAAAAATCGCTTACAGGTACG12.37566e-07
AAAAAATCGGCCCGTTTCTGG12.37566e-07
AAAAAATCGGCTAAGTGAATG12.37566e-07
AAAAAATCGGCTTTTCTAGAG12.37566e-07
AAAAAATCGGGCTATTAATTA12.37566e-07
AAAAAATCGGGCTCAAGCAAA12.37566e-07
AAAAAATCGTAATAATCGGCA12.37566e-07

Read fractions use all reads in this source file as the denominator.