P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972354

RV09_s

Reads
4,157,647
Distinct strings in file
4,138,101
File size
25.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972354
Sample:
SAMEA13183937
SHA-256
912327014f61d35fa919d68eccfdba0bcbd7efd397cb6579b7143ecf1b8a3289

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGATTATTCTAGGAGG12.40521e-07
AAAAAAGATTCAAGGATTGAA12.40521e-07
AAAAAAGATTCACTGATTAAG12.40521e-07
AAAAAAGATTCCTGTGTTTTT12.40521e-07
AAAAAAGATTGTTATTCTATA12.40521e-07
AAAAAAGATTTACGATCTAAA12.40521e-07
AAAAAAGATTTACTCACGGAG12.40521e-07
AAAAAAGATTTTATGTTATAG12.40521e-07
AAAAAAGCAAAACAAGCACCA12.40521e-07
AAAAAAGCAAACTCTGCACTA12.40521e-07
AAAAAAGCAAAGAAAATTAAA12.40521e-07
AAAAAAGCAAAGAAAGCTTTA12.40521e-07
AAAAAAGCAAAGACATAATAA12.40521e-07
AAAAAAGCAACAATGTTTAAT12.40521e-07
AAAAAAGCAACTACCATAACA12.40521e-07
AAAAAAGCAACTTTGAACCCG12.40521e-07
AAAAAAGCAACTTTTACAGTT12.40521e-07
AAAAAAGCAAGAGATAGATTA12.40521e-07
AAAAAAGCAAGATGATGACTA12.40521e-07
AAAAAAGCAAGTATTATCATA12.40521e-07
AAAAAAGCAAGTTCTTCGGCA12.40521e-07
AAAAAAGCAATATATTCCCTA12.40521e-07
AAAAAAGCAATCCTCCGCGTT12.40521e-07
AAAAAAGCAATCTCCTAATTA12.40521e-07
AAAAAAGCAATTATATTAAGA12.40521e-07

Read fractions use all reads in this source file as the denominator.