P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972354

RV09_s

Reads
4,157,647
Distinct strings in file
4,138,101
File size
25.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972354
Sample:
SAMEA13183937
SHA-256
912327014f61d35fa919d68eccfdba0bcbd7efd397cb6579b7143ecf1b8a3289

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTACTTTTTAAAATA12.40521e-07
AAAAAAGTAGACTGTAGTATT12.40521e-07
AAAAAAGTAGAGTCTAAGAGC12.40521e-07
AAAAAAGTAGATACAATTTTA12.40521e-07
AAAAAAGTAGCATATCCTAAA12.40521e-07
AAAAAAGTAGGGATTTATATA12.40521e-07
AAAAAAGTAGGTGATTGTATG12.40521e-07
AAAAAAGTAGTCTAACATTCG12.40521e-07
AAAAAAGTAGTCTTTAGTCAG12.40521e-07
AAAAAAGTAGTGCGCTTTGTA12.40521e-07
AAAAAAGTATAAATTCAAATA12.40521e-07
AAAAAAGTATAAATTGCGGCC12.40521e-07
AAAAAAGTATAACAATAATCA12.40521e-07
AAAAAAGTATATGGTGAGCTC12.40521e-07
AAAAAAGTATCCATCGTTACG12.40521e-07
AAAAAAGTATCCCGCCTGGAG12.40521e-07
AAAAAAGTATCCGCTGAAATG12.40521e-07
AAAAAAGTATCTTAGAGTCTA12.40521e-07
AAAAAAGTATGCCTAGAAACA12.40521e-07
AAAAAAGTATGCTAACTACTA12.40521e-07
AAAAAAGTATGTACAAATTAA12.40521e-07
AAAAAAGTATGTTTGTACGTA12.40521e-07
AAAAAAGTATTAATTGCTGAT12.40521e-07
AAAAAAGTATTAGATGTCCAG12.40521e-07
AAAAAAGTATTATTCGAGAAC12.40521e-07

Read fractions use all reads in this source file as the denominator.