These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8972356
RV11_s
- Reads
- 3,795,610
- Distinct strings in file
- 3,778,101
- File size
- 23.1 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51212
- Archive record:
- ERR8972356
- Sample:
- SAMEA13183939
- SHA-256
- d25fdf67b314a5a5c5a8503aea8c684b8ae0ad4b889c8c4262eabe89b0c1bce1
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAATAGGCTAACAATCAG | 1 | 2.63462e-07 |
| AAAAAATAGGGTCATTTATTA | 1 | 2.63462e-07 |
| AAAAAATAGGTCATTCGTCTC | 1 | 2.63462e-07 |
| AAAAAATAGGTGACGAAATTT | 1 | 2.63462e-07 |
| AAAAAATAGGTTGTTTATCCG | 1 | 2.63462e-07 |
| AAAAAATAGGTTTAAGAAATA | 1 | 2.63462e-07 |
| AAAAAATAGTAAAATTGTACC | 1 | 2.63462e-07 |
| AAAAAATAGTAAATCAATTTA | 1 | 2.63462e-07 |
| AAAAAATAGTAACTGAAATGC | 1 | 2.63462e-07 |
| AAAAAATAGTACCAGAAATCC | 1 | 2.63462e-07 |
| AAAAAATAGTCACTAATCTTA | 1 | 2.63462e-07 |
| AAAAAATAGTCCGTCTTTATC | 1 | 2.63462e-07 |
| AAAAAATAGTCGCACGCCCAG | 1 | 2.63462e-07 |
| AAAAAATAGTTAAACATTATA | 1 | 2.63462e-07 |
| AAAAAATAGTTGGCTTCGTTT | 1 | 2.63462e-07 |
| AAAAAATAGTTGTAATTTGCC | 1 | 2.63462e-07 |
| AAAAAATAGTTGTAGTTAGGA | 1 | 2.63462e-07 |
| AAAAAATAGTTTAAACTACAA | 1 | 2.63462e-07 |
| AAAAAATAGTTTCGATCATGA | 1 | 2.63462e-07 |
| AAAAAATAGTTTGGATATACG | 1 | 2.63462e-07 |
| AAAAAATAGTTTGGATTTCAA | 1 | 2.63462e-07 |
| AAAAAATATAAAAAACCATCA | 1 | 2.63462e-07 |
| AAAAAATATAAAATCCAGTAA | 1 | 2.63462e-07 |
| AAAAAATATAAACATACTTAA | 1 | 2.63462e-07 |
| AAAAAATATAAACATTACATA | 1 | 2.63462e-07 |
Read fractions use all reads in this source file as the denominator.