P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAATAATCTACTTATAG12.08418e-07
AAAAAAATAATGTAAAATTGG12.08418e-07
AAAAAAATAATGTTCTGAATG12.08418e-07
AAAAAAATAATTAATAGATAA12.08418e-07
AAAAAAATAATTAATGACTAA12.08418e-07
AAAAAAATAATTAATTAAACA12.08418e-07
AAAAAAATAATTACAACAATA12.08418e-07
AAAAAAATAATTATAGGATTA12.08418e-07
AAAAAAATAATTATTCTCTTG12.08418e-07
AAAAAAATAATTGAGCAATCA12.08418e-07
AAAAAAATAATTGATTCGATT12.08418e-07
AAAAAAATAATTGGTTTCTTA12.08418e-07
AAAAAAATAATTGGTTTCTTG12.08418e-07
AAAAAAATAATTTATTTTTAA12.08418e-07
AAAAAAATAATTTCTCTAGCG12.08418e-07
AAAAAAATACAACATATCGAC12.08418e-07
AAAAAAATACAACGTAGAAAG12.08418e-07
AAAAAAATACAACGTCTTTAA12.08418e-07
AAAAAAATACAAGCTTACAAA12.08418e-07
AAAAAAATACAAGTCGGAAGG12.08418e-07
AAAAAAATACAATCAGGTTTA12.08418e-07
AAAAAAATACACAAACAAAAA12.08418e-07
AAAAAAATACACACATTCCTA12.08418e-07
AAAAAAATACACTACGTCGAA12.08418e-07
AAAAAAATACAGAATACAATA12.08418e-07

Read fractions use all reads in this source file as the denominator.