P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTCGCTATCATATAA12.08418e-07
AAAAAAGTCGCTATCATATAG12.08418e-07
AAAAAAGTCGCTATCATATAT12.08418e-07
AAAAAAGTCGCTTACTCGAGC12.08418e-07
AAAAAAGTCGTTTTATGATAC12.08418e-07
AAAAAAGTCTAAAAAAGTGTG12.08418e-07
AAAAAAGTCTAAAAACTTCAA12.08418e-07
AAAAAAGTCTAAATCAAGAAA12.08418e-07
AAAAAAGTCTAAATCAAGAAG12.08418e-07
AAAAAAGTCTAACTGCAAACC12.08418e-07
AAAAAAGTCTAGGTACTGAAG12.08418e-07
AAAAAAGTCTATATATATAGT12.08418e-07
AAAAAAGTCTCGATTGCTTGG12.08418e-07
AAAAAAGTCTCTAATAACTCA12.08418e-07
AAAAAAGTCTCTTTCCTTTCA12.08418e-07
AAAAAAGTCTGTACCGCATTT12.08418e-07
AAAAAAGTCTTAAATGTAAAG12.08418e-07
AAAAAAGTCTTAACTCTAAAG12.08418e-07
AAAAAAGTCTTATCACATACC12.08418e-07
AAAAAAGTCTTATCACATACG12.08418e-07
AAAAAAGTCTTATTCCATTAG12.08418e-07
AAAAAAGTCTTTACTAGCTAA12.08418e-07
AAAAAAGTGAAAAAAATATAA12.08418e-07
AAAAAAGTGAACAAATTCCAA12.08418e-07
AAAAAAGTGAACACGTAGAAG12.08418e-07

Read fractions use all reads in this source file as the denominator.