P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAATATCTATAATACATA12.08418e-07
AAAAAATATCTATGATAACCA12.08418e-07
AAAAAATATCTATGCATTACA12.08418e-07
AAAAAATATCTCAGGAGACGA12.08418e-07
AAAAAATATCTCCGAATTGTT12.08418e-07
AAAAAATATCTCGCTCATATA12.08418e-07
AAAAAATATCTGAATTCACCG12.08418e-07
AAAAAATATCTGATCCCTACA12.08418e-07
AAAAAATATCTGATCCCTCCC12.08418e-07
AAAAAATATCTGCGAAATCCA12.08418e-07
AAAAAATATCTTCACTATGTT12.08418e-07
AAAAAATATCTTCACTTCGAA12.08418e-07
AAAAAATATCTTCATTCACAT12.08418e-07
AAAAAATATCTTTATTATAAG12.08418e-07
AAAAAATATGACCAGTCTGGA12.08418e-07
AAAAAATATGACGAGGCTTGA12.08418e-07
AAAAAATATGAGCCATATTTC12.08418e-07
AAAAAATATGATCCGTGATAA24.16836e-07
AAAAAATATGATCGTCAGCCG12.08418e-07
AAAAAATATGATGGTTTAAAC12.08418e-07
AAAAAATATGCAAAGATAATT12.08418e-07
AAAAAATATGCATAGTTGCCG12.08418e-07
AAAAAATATGCGAATTCGTCG12.08418e-07
AAAAAATATGCTAACGACTAA12.08418e-07
AAAAAATATGGATCAATGTCC12.08418e-07

Read fractions use all reads in this source file as the denominator.