P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAATTAGTCTGCGTGAAA12.08418e-07
AAAAAATTAGTGCTTACCCTG12.08418e-07
AAAAAATTAGTTATTTTCAGC12.08418e-07
AAAAAATTATAAAAAGAAATT12.08418e-07
AAAAAATTATAAATAAATATA12.08418e-07
AAAAAATTATAAATAATAAAA12.08418e-07
AAAAAATTATAAATTACGTAA12.08418e-07
AAAAAATTATAACTTTAATTT12.08418e-07
AAAAAATTATAAGGTCATAAG24.16836e-07
AAAAAATTATAATGTCCTACA12.08418e-07
AAAAAATTATACCTTTTCTAG24.16836e-07
AAAAAATTATAGACATACTAA12.08418e-07
AAAAAATTATAGATCTCACTT12.08418e-07
AAAAAATTATATAGTATCCAA12.08418e-07
AAAAAATTATATTACTTGACC12.08418e-07
AAAAAATTATATTCGTAGCCA12.08418e-07
AAAAAATTATATTCGTAGCCG12.08418e-07
AAAAAATTATATTGCAAATAG12.08418e-07
AAAAAATTATATTTTTGGATA12.08418e-07
AAAAAATTATCAATAAAACTA12.08418e-07
AAAAAATTATCAATCTAATTA12.08418e-07
AAAAAATTATCAGGATAGTCA12.08418e-07
AAAAAATTATCATGAACATAG12.08418e-07
AAAAAATTATCCACTACTTTG12.08418e-07
AAAAAATTATCCTAAGTTCCA12.08418e-07

Read fractions use all reads in this source file as the denominator.