P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972378

RV33_s

Reads
4,915,440
Distinct strings in file
4,849,824
File size
28.9 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972378
Sample:
SAMEA13183961
SHA-256
d4147635c681852585b82026ad73d71cbd966d3f45346edffaf32c748dcb4101

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTTAGGCACCAACTA12.03441e-07
AAAAAAGTTAGTAGTCAAGCG12.03441e-07
AAAAAAGTTAGTCCGGAACTA12.03441e-07
AAAAAAGTTATAAACTTTGAA12.03441e-07
AAAAAAGTTATAATATCATTT12.03441e-07
AAAAAAGTTATAATTCAACGC12.03441e-07
AAAAAAGTTATCTCTCTTGAA12.03441e-07
AAAAAAGTTATCTTTCAGACA12.03441e-07
AAAAAAGTTATTCTCGTTAAA12.03441e-07
AAAAAAGTTATTCTTCATTAT12.03441e-07
AAAAAAGTTCACATTACCCCA12.03441e-07
AAAAAAGTTCACCATTTGAGG12.03441e-07
AAAAAAGTTCAGGCCTTTCGG12.03441e-07
AAAAAAGTTCCTACTGGTCAC12.03441e-07
AAAAAAGTTCCTAGCGTTCTG12.03441e-07
AAAAAAGTTCCTTATCTCCTA12.03441e-07
AAAAAAGTTCGAACTCGGAAT12.03441e-07
AAAAAAGTTCGAGACCTCAAA12.03441e-07
AAAAAAGTTCGCATTTTATAG12.03441e-07
AAAAAAGTTCTAATACAGATA12.03441e-07
AAAAAAGTTCTATCATTCGAC12.03441e-07
AAAAAAGTTCTCTACAGTTTA12.03441e-07
AAAAAAGTTGAATACATCGAG12.03441e-07
AAAAAAGTTGACGTTCATTAA12.03441e-07
AAAAAAGTTGAGTTCTTTTGC12.03441e-07

Read fractions use all reads in this source file as the denominator.