P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972378

RV33_s

Reads
4,915,440
Distinct strings in file
4,849,824
File size
28.9 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972378
Sample:
SAMEA13183961
SHA-256
d4147635c681852585b82026ad73d71cbd966d3f45346edffaf32c748dcb4101

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAATTATTAATTCTATCA12.03441e-07
AAAAAATTATTACCGGTAATA12.03441e-07
AAAAAATTATTACGTCTCTAG12.03441e-07
AAAAAATTATTAGATCTACAA12.03441e-07
AAAAAATTATTAGTACAACAA12.03441e-07
AAAAAATTATTCACTACGTCG12.03441e-07
AAAAAATTATTCCCCTCTCCG12.03441e-07
AAAAAATTATTCTAATAATCC12.03441e-07
AAAAAATTATTCTAGCAATCA12.03441e-07
AAAAAATTATTCTCTTTTCTT12.03441e-07
AAAAAATTATTGAACTAACGC12.03441e-07
AAAAAATTATTGATGCTGAAA12.03441e-07
AAAAAATTATTGCCAGTGTCG12.03441e-07
AAAAAATTATTTACGTACGTA12.03441e-07
AAAAAATTATTTGCTCAAGAG12.03441e-07
AAAAAATTATTTTGAAATTTA12.03441e-07
AAAAAATTCAAACTCTTTCAG24.06881e-07
AAAAAATTCAAATATGCATAA12.03441e-07
AAAAAATTCAAATGAGAAATA12.03441e-07
AAAAAATTCAACCCTCAGCCC12.03441e-07
AAAAAATTCAAGTCAATAGTT12.03441e-07
AAAAAATTCAAGTCTTATCGG12.03441e-07
AAAAAATTCAATAACATTACA12.03441e-07
AAAAAATTCAATACACATGTA12.03441e-07
AAAAAATTCAATAGTTCTTAG12.03441e-07

Read fractions use all reads in this source file as the denominator.