P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972383

RV38_s

Reads
4,076,576
Distinct strings in file
3,948,599
File size
17.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972383
Sample:
SAMEA13183966
SHA-256
158782390ea5027591ffc6d0eb026621b7bd9a8777a54e47691d30b09780d10c

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAAGACACACATTAAAA12.45304e-07
AAAAAAAGAGAAAATTAATAA12.45304e-07
AAAAAAAGATAAATAAAAAAA12.45304e-07
AAAAAAAGATAAATGATAATA12.45304e-07
AAAAAAAGATAAATTCTCGGA12.45304e-07
AAAAAAAGATAACAAAAATCA12.45304e-07
AAAAAAAGATAATAAATAATA12.45304e-07
AAAAAAAGATAATTTTAAATA12.45304e-07
AAAAAAAGATACTATATAAAA12.45304e-07
AAAAAAAGATACTTATTAATG12.45304e-07
AAAAAAAGATATAATATAATA12.45304e-07
AAAAAAAGATATGAATAATTA12.45304e-07
AAAAAAAGATATTAATAACTG12.45304e-07
AAAAAAAGATGAATTATGTAG12.45304e-07
AAAAAAAGATTTAATTTTTCA12.45304e-07
AAAAAAAGATTTTAAAAAAAA12.45304e-07
AAAAAAAGCAAAATAATACTA12.45304e-07
AAAAAAAGCAAATAAAATTAT12.45304e-07
AAAAAAAGCAATATAAGAATA12.45304e-07
AAAAAAAGCAATATTCATAAA12.45304e-07
AAAAAAAGCAATATTTTCATG12.45304e-07
AAAAAAAGCACTACAATATTA12.45304e-07
AAAAAAAGCATAAATCATAGA12.45304e-07
AAAAAAAGCATAGTACCCATA12.45304e-07
AAAAAAAGCATATTAAGAAAA12.45304e-07

Read fractions use all reads in this source file as the denominator.