P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972383

RV38_s

Reads
4,076,576
Distinct strings in file
3,948,599
File size
17.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972383
Sample:
SAMEA13183966
SHA-256
158782390ea5027591ffc6d0eb026621b7bd9a8777a54e47691d30b09780d10c

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGAATCATATTTCATA12.45304e-07
AAAAAAGAATTAATGGAGAAA12.45304e-07
AAAAAAGAATTAATGTTACAC12.45304e-07
AAAAAAGAATTAGACTTAAAA12.45304e-07
AAAAAAGAATTATATATATCA12.45304e-07
AAAAAAGAATTATGATATCTA12.45304e-07
AAAAAAGAATTATTAACATAA12.45304e-07
AAAAAAGAATTATTAATACTA12.45304e-07
AAAAAAGAATTATTAATTATG12.45304e-07
AAAAAAGAATTGTAAATTATA12.45304e-07
AAAAAAGAATTTTTTATTATG12.45304e-07
AAAAAAGAATTTTTTTCAACA12.45304e-07
AAAAAAGACAAATATAAAAAA12.45304e-07
AAAAAAGACAATAATAACAAA12.45304e-07
AAAAAAGACCGAAAATTAAAA12.45304e-07
AAAAAAGACTATTATAATCAA12.45304e-07
AAAAAAGACTTATGAATTATA12.45304e-07
AAAAAAGAGAAAATTATAATA12.45304e-07
AAAAAAGAGAAAATTATTAAT12.45304e-07
AAAAAAGAGAGTTGATTGTCA12.45304e-07
AAAAAAGAGATATGAATTTTA12.45304e-07
AAAAAAGAGATATGATATTCG12.45304e-07
AAAAAAGAGATATTAAACATT12.45304e-07
AAAAAAGAGCAAAAATTAAAA12.45304e-07
AAAAAAGAGCAATATTTGATA12.45304e-07

Read fractions use all reads in this source file as the denominator.