P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972383

RV38_s

Reads
4,076,576
Distinct strings in file
3,948,599
File size
17.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972383
Sample:
SAMEA13183966
SHA-256
158782390ea5027591ffc6d0eb026621b7bd9a8777a54e47691d30b09780d10c

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGCATAATTAATATTA12.45304e-07
AAAAAAGCATAATTCATAACA12.45304e-07
AAAAAAGCATAATTCATAACG12.45304e-07
AAAAAAGCATAATTTTTTATA12.45304e-07
AAAAAAGCATATCAATTATGC12.45304e-07
AAAAAAGCATATTTAATTTTT12.45304e-07
AAAAAAGCATATTTCAATTTA12.45304e-07
AAAAAAGCATGAAATATAATA12.45304e-07
AAAAAAGCATGTTCATAAAAA12.45304e-07
AAAAAAGCATTAATAATTATT12.45304e-07
AAAAAAGCATTAATCTTAATA12.45304e-07
AAAAAAGCATTATTAATATTA12.45304e-07
AAAAAAGCATTTTAATATTAA12.45304e-07
AAAAAAGCCAATAAGATATTA12.45304e-07
AAAAAAGCCATAAGAAATATA12.45304e-07
AAAAAAGCGAAATTATTTCCA12.45304e-07
AAAAAAGCGATATGATTTATT12.45304e-07
AAAAAAGCGATTAATATTATA12.45304e-07
AAAAAAGCGTAATAATTCATA12.45304e-07
AAAAAAGCGTATGAATTATTT12.45304e-07
AAAAAAGCGTTATGAATCGTA12.45304e-07
AAAAAAGCTAATTGAACTATA12.45304e-07
AAAAAAGCTATAAAAAATAAA12.45304e-07
AAAAAAGCTATGCAAATATCA12.45304e-07
AAAAAAGCTGCATAGATTATA12.45304e-07

Read fractions use all reads in this source file as the denominator.