P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972384

RV39_s

Reads
3,522,850
Distinct strings in file
3,473,692
File size
20.9 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972384
Sample:
SAMEA13183967
SHA-256
5298ece4c582f54207484dbdc473b19d23d76b6df6200a98bf1d95e7ffd935e5

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAAAAAAAAAATAAAAA12.83861e-07
AAAAAAAAAAAAAAATTGTCA12.83861e-07
AAAAAAAAAAAAAAGACAAAA12.83861e-07
AAAAAAAAAAAAAATAATAAA12.83861e-07
AAAAAAAAAAAAACAACAGAA12.83861e-07
AAAAAAAAAAAAAGACACCAA12.83861e-07
AAAAAAAAAAAAATAATATAA12.83861e-07
AAAAAAAAAAAAATTATACTA12.83861e-07
AAAAAAAAAAAACAAAAAAAA12.83861e-07
AAAAAAAAAAAATAAAACATA12.83861e-07
AAAAAAAAAAAATAATTCTCA12.83861e-07
AAAAAAAAAAAATATCTATTA12.83861e-07
AAAAAAAAAAAATCAAAATTA12.83861e-07
AAAAAAAAAAAATTCAAATAA12.83861e-07
AAAAAAAAAAACAACATAATA12.83861e-07
AAAAAAAAAAACTCATAAAAA12.83861e-07
AAAAAAAAAAACTCTATCAAA12.83861e-07
AAAAAAAAAAACTTAAGATAA12.83861e-07
AAAAAAAAAAACTTCGAATTA12.83861e-07
AAAAAAAAAAACTTCTTCCGC12.83861e-07
AAAAAAAAAAACTTTCATATA12.83861e-07
AAAAAAAAAAAGAATATTAAA12.83861e-07
AAAAAAAAAAATAAATTACAA12.83861e-07
AAAAAAAAAAATCATTAAACA12.83861e-07
AAAAAAAAAAATTAATTCATA12.83861e-07

Read fractions use all reads in this source file as the denominator.