P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130376

RV03_s

Reads
358,911
Distinct strings in file
358,836
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130376
Sample:
SAMEA13317612
SHA-256
67d87ee473f85bdc315ed48c7b5478853626d1bf454bfbe3c7b1d3728683a715

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTAGCACTCATTTTAACA12.78621e-06
AAAGTAGCAGTAAGGGCTACA12.78621e-06
AAAGTAGCATATTCGTGAAAA12.78621e-06
AAAGTAGCATTGCCTATTTAA12.78621e-06
AAAGTAGCCATAGTTTTATCA12.78621e-06
AAAGTAGCGAATCTGTTCCGA12.78621e-06
AAAGTAGCTCACCGAGAGGTA12.78621e-06
AAAGTAGGGGAGTAGTTAGGA12.78621e-06
AAAGTAGGGGTGGTAGATCAA12.78621e-06
AAAGTAGGGTACAAAACGACA12.78621e-06
AAAGTAGGGTGAAGGGGTAAA12.78621e-06
AAAGTAGGTATAGGAAGCGAA12.78621e-06
AAAGTAGTAGCCATCTATCCA12.78621e-06
AAAGTAGTCAGTTTTCGGAGA12.78621e-06
AAAGTAGTGCCCGCGGGCGCA12.78621e-06
AAAGTAGTGTTTAATGGGGCA12.78621e-06
AAAGTAGTTCGCGCGAGTGTA12.78621e-06
AAAGTATAATTATTTTATTAA12.78621e-06
AAAGTATACCATTCTGAATGA12.78621e-06
AAAGTATAGCTTTTACAACAA12.78621e-06
AAAGTATAGTCTTTAATCTCA12.78621e-06
AAAGTATATCAGTCACCTCAA12.78621e-06
AAAGTATATTTTTTTGTCAAA12.78621e-06
AAAGTATCAATATTTTCGACA12.78621e-06
AAAGTATCTGTAATTTTCTGA12.78621e-06

Read fractions use all reads in this source file as the denominator.