P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130376

RV03_s

Reads
358,911
Distinct strings in file
358,836
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130376
Sample:
SAMEA13317612
SHA-256
67d87ee473f85bdc315ed48c7b5478853626d1bf454bfbe3c7b1d3728683a715

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTGCGTACTTCACTA12.78621e-06
AAAAAAGTTGACGCAATATTA12.78621e-06
AAAAAATAACATTAATATAAA12.78621e-06
AAAAAATACCTTTCTGAATAA12.78621e-06
AAAAAATATCATCCCTACCTA12.78621e-06
AAAAAATATGTAGTCCACGCA12.78621e-06
AAAAAATCTAGCAGGTTAAAA12.78621e-06
AAAAAATCTTGTTAGGAATAA12.78621e-06
AAAAAATGAGTCAATCTGCTA12.78621e-06
AAAAAATGATACAACATCATA12.78621e-06
AAAAAATGGTCAAGTAGGATA12.78621e-06
AAAAAATGTGAATAACCCTTA12.78621e-06
AAAAAATGTGATGAATGATCA12.78621e-06
AAAAAATGTTTGGTCTTTTGA12.78621e-06
AAAAAATGTTTTATATGACTA12.78621e-06
AAAAAATTATACAGATTACGA12.78621e-06
AAAAAATTCAACATACAATTA12.78621e-06
AAAAAATTCATATTCATTAAA12.78621e-06
AAAAAATTGGAGATTTGTCAA12.78621e-06
AAAAAATTTTCATGGCCCGCA12.78621e-06
AAAAAATTTTGTCGTTCACGA12.78621e-06
AAAAAATTTTTACCATAGGTA12.78621e-06
AAAAAATTTTTTAATCGGCCA12.78621e-06
AAAAACAAATGCTAAATTGCA12.78621e-06
AAAAACAACCCTCCTCAGTCA12.78621e-06

Read fractions use all reads in this source file as the denominator.