These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130378
RV05_s
- Reads
- 230,271
- Distinct strings in file
- 230,142
- File size
- 1.5 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130378
- Sample:
- SAMEA13317614
- SHA-256
- 77f1848c9d7aea8b7331d09dfd404d9d1331438616529f2fdef5b217bdee8f2a
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGTCGTGTTGCCATTATA | 1 | 4.34271e-06 |
| AAAAGTCGTTCTTCTATCGGA | 1 | 4.34271e-06 |
| AAAAGTCTAGCTATATGTATA | 1 | 4.34271e-06 |
| AAAAGTCTCATGATAATCCAA | 1 | 4.34271e-06 |
| AAAAGTCTTCGCGGTACATAA | 1 | 4.34271e-06 |
| AAAAGTCTTCGTCACTGGTGA | 1 | 4.34271e-06 |
| AAAAGTCTTGTGTTGTAAAAA | 1 | 4.34271e-06 |
| AAAAGTGAATGTGTGTGTTAA | 1 | 4.34271e-06 |
| AAAAGTGATATCTTCACGGTA | 1 | 4.34271e-06 |
| AAAAGTGCACATCCTTTAGAA | 1 | 4.34271e-06 |
| AAAAGTGCGCGGCCGGGGCAA | 1 | 4.34271e-06 |
| AAAAGTGCGGTGGCGTCCCGA | 1 | 4.34271e-06 |
| AAAAGTGCGTCCGGCGGGGCA | 1 | 4.34271e-06 |
| AAAAGTGGAATCGTGCAGAGA | 1 | 4.34271e-06 |
| AAAAGTGGGGAACTCTTTAGA | 1 | 4.34271e-06 |
| AAAAGTGGGGGCGATACCCGA | 1 | 4.34271e-06 |
| AAAAGTGGGGTTCGCACCACA | 1 | 4.34271e-06 |
| AAAAGTGGTAAGCACGCCAGA | 1 | 4.34271e-06 |
| AAAAGTGGTATCCAACCTGCA | 1 | 4.34271e-06 |
| AAAAGTGGTCCAATCTCGGTA | 1 | 4.34271e-06 |
| AAAAGTGGTTACAGCCCCACA | 1 | 4.34271e-06 |
| AAAAGTGTCAATTAGAGTAAA | 1 | 4.34271e-06 |
| AAAAGTGTGGGGTTAACTAGA | 1 | 4.34271e-06 |
| AAAAGTGTGTGTTCAGCTCTA | 1 | 4.34271e-06 |
| AAAAGTGTTGGTACCAAAGCA | 1 | 4.34271e-06 |
Read fractions use all reads in this source file as the denominator.