P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130380

RV07_s

Reads
467,962
Distinct strings in file
467,482
File size
3.0 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130380
Sample:
SAMEA13317616
SHA-256
bcb5cf7b9c9040c6cdb0a6f9888b5113b6e80a79966505c51a436d7af5a39b01

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAAAAAAAAAAAAAAAA71.49585e-05
AAAAAAAAAAAAAAAAAAGTA12.13693e-06
AAAAAAAAAATTGTAATTGCA12.13693e-06
AAAAAAAAACAGGATCGCTGA12.13693e-06
AAAAAAAAACTTATATAGTCA12.13693e-06
AAAAAAAAATGAATTTTTGAA12.13693e-06
AAAAAAAAATGAGTTAGCAAA12.13693e-06
AAAAAAAACCATCTGCACTAA12.13693e-06
AAAAAAAACGGTATAAAGTAA12.13693e-06
AAAAAAAAGATGTGGCATCAA12.13693e-06
AAAAAAAATATTTCAGAACAA12.13693e-06
AAAAAAAATCGGGAGAAATAA12.13693e-06
AAAAAAAATGGTGAAATTCAG12.13693e-06
AAAAAAAATGGTTAAGTGTCA12.13693e-06
AAAAAAACACCGTAACATATA12.13693e-06
AAAAAAACACGTGTTTAGGCA12.13693e-06
AAAAAAACATAGCAGGTATAA12.13693e-06
AAAAAAACATTCCCGAGTTCA12.13693e-06
AAAAAAACCTTTAAATTCATA12.13693e-06
AAAAAAACTCAAGGTAGGTGA12.13693e-06
AAAAAAACTCTATAAGGAATA12.13693e-06
AAAAAAACTGAAGTGCCAAGA12.13693e-06
AAAAAAAGATAAGCCATCACA12.13693e-06
AAAAAAAGATGCACCTTTAAA12.13693e-06
AAAAAAAGCAGATCGTACACA12.13693e-06

Read fractions use all reads in this source file as the denominator.