P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130380

RV07_s

Reads
467,962
Distinct strings in file
467,482
File size
3.0 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130380
Sample:
SAMEA13317616
SHA-256
bcb5cf7b9c9040c6cdb0a6f9888b5113b6e80a79966505c51a436d7af5a39b01

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGATAGGTTTGTCTCACTA12.13693e-06
AAAGATAGTCTCTATTTTAAT12.13693e-06
AAAGATAGTGCGTCAGCAAGA12.13693e-06
AAAGATAGTGTGGAATAGAAA12.13693e-06
AAAGATATACTTATCTTATTA12.13693e-06
AAAGATATATACAGACAATGA12.13693e-06
AAAGATATATTCTTAATTTGA12.13693e-06
AAAGATATATTTATTCGCACA12.13693e-06
AAAGATATCAAGATTAGTTAG12.13693e-06
AAAGATATGATTAGTTACAGA12.13693e-06
AAAGATATGGGCTCCGTTTAA12.13693e-06
AAAGATATGTATCATCGTAAA12.13693e-06
AAAGATATTCATTACATCCTA12.13693e-06
AAAGATATTCTGAACGTTGTA12.13693e-06
AAAGATATTGGGCCTTAGTGA12.13693e-06
AAAGATCAAACCCCGTGGTCA12.13693e-06
AAAGATCACCCATTGCTAGTA12.13693e-06
AAAGATCAGAGTTGAATGGCA12.13693e-06
AAAGATCAGCATCGGGGAGGA12.13693e-06
AAAGATCAGCCACCGTGAACA12.13693e-06
AAAGATCATAGATGCGACGGA12.13693e-06
AAAGATCATGTACATTCCAGA12.13693e-06
AAAGATCCATTTCGTGATGCA12.13693e-06
AAAGATCCCAGGGCGATACTA12.13693e-06
AAAGATCCCGGCGTTACACCA12.13693e-06

Read fractions use all reads in this source file as the denominator.