P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130388

RV15_s

Reads
341,538
Distinct strings in file
341,254
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130388
Sample:
SAMEA13317624
SHA-256
9a6dd795a8fff455654d09f8c9a78a654055c2ede9e0d3bce3164a7c1a5dba05

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGAGTTCCTAATTAAAAA12.92793e-06
AAAAGAGTTTGCGGGGGAGGA12.92793e-06
AAAAGATAAAGGTCGCTAGCA12.92793e-06
AAAAGATAATACAGATTCTGA12.92793e-06
AAAAGATATCCCTCATTAAAA12.92793e-06
AAAAGATATTAGAAGTCGGGA12.92793e-06
AAAAGATATTGGTATGGTTTA12.92793e-06
AAAAGATCATAATACCACCAA12.92793e-06
AAAAGATCATAGTGGCGTCCA12.92793e-06
AAAAGATCATGGACATTCTTA12.92793e-06
AAAAGATCCAAATTAATATAA12.92793e-06
AAAAGATCCGTGTACCCCTGA12.92793e-06
AAAAGATCGGGTGCGATGCCA12.92793e-06
AAAAGATCTCCGGTCTCAGCA12.92793e-06
AAAAGATGCCTGCTGCGTTGA12.92793e-06
AAAAGATGGTAGATTCCTCAA12.92793e-06
AAAAGATGTCTGCCATTTCAA12.92793e-06
AAAAGATGTTTAATGTAGGCA12.92793e-06
AAAAGATTATGGATCAAATAA12.92793e-06
AAAAGATTGCGCCGTACCGAG12.92793e-06
AAAAGATTTAAGAATCAGTAA12.92793e-06
AAAAGATTTCTACGATTTAAA12.92793e-06
AAAAGATTTGTGTTTTGTATA12.92793e-06
AAAAGCAAATACAGGGACTAA12.92793e-06
AAAAGCAAATCAGTTCTCCAA12.92793e-06

Read fractions use all reads in this source file as the denominator.