P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130391

RV18_s

Reads
369,384
Distinct strings in file
366,947
File size
2.4 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130391
Sample:
SAMEA13317627
SHA-256
02fc96f06fa5cf3ace182c3a2a42eec21878ab2c75735e511fc3e50a8dedd384

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATCTGCCGACCTAATATA12.70721e-06
AAAATCTGCGATGCCAGCACA12.70721e-06
AAAATCTGTATATAGGCGTCA12.70721e-06
AAAATCTTAAGATTAGTAATA12.70721e-06
AAAATCTTATAAAACATAACA12.70721e-06
AAAATCTTCAATATCCATGCA12.70721e-06
AAAATCTTCAGAATCTGTTAA12.70721e-06
AAAATCTTCAGGCTTACAACA12.70721e-06
AAAATCTTCCTAGGAACACAA12.70721e-06
AAAATCTTGCTTTTTCAAATA12.70721e-06
AAAATCTTTCGGTTTCACTAA12.70721e-06
AAAATCTTTCTCCAGAAGATA12.70721e-06
AAAATCTTTTCGGGCCATCCA12.70721e-06
AAAATCTTTTTTTAGAAAGTA12.70721e-06
AAAATGAAAAGTTCTACATCA12.70721e-06
AAAATGAACCCAGCAGATAGA12.70721e-06
AAAATGAACGTCACGCAGTGA12.70721e-06
AAAATGAAGGACGGGGCGTAA12.70721e-06
AAAATGAAGTTGCAACAGAAA12.70721e-06
AAAATGAAGTTGTCTTTTTAA12.70721e-06
AAAATGAATCACTTTATAGTA12.70721e-06
AAAATGACAATATCAGGAAAA12.70721e-06
AAAATGACAGTCATCTCTAAA12.70721e-06
AAAATGACCATGGATTTCGAA12.70721e-06
AAAATGACCCCGATGCTTAAA12.70721e-06

Read fractions use all reads in this source file as the denominator.