P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTATGCTCGCAAACGGA12.71572e-06
AAAAGTATGGCCAAATTACTA12.71572e-06
AAAAGTATGTCCAATTACTGA12.71572e-06
AAAAGTATTAATCAGACTCGA12.71572e-06
AAAAGTATTGATCACAGCCTA12.71572e-06
AAAAGTATTGTTTTTTATTTA12.71572e-06
AAAAGTCAAAAAACTCGGTAA12.71572e-06
AAAAGTCACAAATTGGTATAA12.71572e-06
AAAAGTCACCTACCCTGCTAA12.71572e-06
AAAAGTCACTAAAAACTCTAA12.71572e-06
AAAAGTCACTAGTGATAACTA12.71572e-06
AAAAGTCAGCGTTCGGGTGTA12.71572e-06
AAAAGTCATCCGTAACACTGA12.71572e-06
AAAAGTCATGCGAGTTCAATA12.71572e-06
AAAAGTCATGGGTAGGCCGGA12.71572e-06
AAAAGTCCACTGCAAAAAAGA12.71572e-06
AAAAGTCCATATTCTGGTTAA12.71572e-06
AAAAGTCCATCAAAATTAGAA12.71572e-06
AAAAGTCCATCACTCGGTATA12.71572e-06
AAAAGTCCCTCCAAGACAAGA12.71572e-06
AAAAGTCCTGTGTGCCTCATA12.71572e-06
AAAAGTCGAGCTAGTCGTCAA12.71572e-06
AAAAGTCGAGTGCTATACAGA12.71572e-06
AAAAGTCGATCTTGATTTCTA12.71572e-06
AAAAGTCGCAATGCTTAGGTA12.71572e-06

Read fractions use all reads in this source file as the denominator.