P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAATTATAGATTTTCATA12.71572e-06
AAAAAATTATCGTAACCTACA12.71572e-06
AAAAAATTCATTATACTATCA12.71572e-06
AAAAAATTCCGATAACTTTAA12.71572e-06
AAAAAATTGAATAACGTTGTA12.71572e-06
AAAAAATTGCAAATATGCGTA12.71572e-06
AAAAAATTGTGATGGCTATGA12.71572e-06
AAAAAATTTAATACGTTTGTA12.71572e-06
AAAAAATTTACTGTTTCACAA12.71572e-06
AAAAAATTTATCGTGAGGTTA12.71572e-06
AAAAAATTTCAAGTAGTAGGA12.71572e-06
AAAAAATTTTATGTGATTTTA12.71572e-06
AAAAAATTTTCGGTCAAATTA12.71572e-06
AAAAAATTTTTTGAGGTATAA12.71572e-06
AAAAACAAACATGAATACTCA12.71572e-06
AAAAACAAACGAGACAGGAAA12.71572e-06
AAAAACAAAGTTCATATTCAA12.71572e-06
AAAAACAAATGACCGGAGTAA12.71572e-06
AAAAACAACAACTCTCTATTA12.71572e-06
AAAAACAACACTGATCGGGGA12.71572e-06
AAAAACAACATGTTTCAAGCA12.71572e-06
AAAAACAAGGAATCACCAACA12.71572e-06
AAAAACAATTAATAAGTTATA12.71572e-06
AAAAACACAGAAAAATAACGA12.71572e-06
AAAAACACCAAAGTTGGCGGA12.71572e-06

Read fractions use all reads in this source file as the denominator.