P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACCCATCATAAAATTTCTA12.71572e-06
AAACCCATCATTCTACCCCTA12.71572e-06
AAACCCATCTCACATTGGTAA12.71572e-06
AAACCCATCTCCCTCCCTCAA12.71572e-06
AAACCCATGATGCTCGAACGA12.71572e-06
AAACCCATTATTCGTTATACA12.71572e-06
AAACCCATTGCGGCACATAAA12.71572e-06
AAACCCATTTGCGTGCTATAA12.71572e-06
AAACCCCACTTCAACCGAGAA12.71572e-06
AAACCCCCAAAGCTTAAATTA12.71572e-06
AAACCCCCGGTATGGGTACTA12.71572e-06
AAACCCCGCCGGAGTGTTGGA12.71572e-06
AAACCCCGGCGCGCAGAACAA12.71572e-06
AAACCCCGGGTCCCCCCTCTA12.71572e-06
AAACCCCTAAGACTTCATCAA12.71572e-06
AAACCCCTAGGTGTAGAGTCA12.71572e-06
AAACCCCTGGTTACAAGGCTA12.71572e-06
AAACCCGAATTACGTCAAGAA12.71572e-06
AAACCCGCGTCAATACTCCCA12.71572e-06
AAACCCGGGGAGCATCTCCAA12.71572e-06
AAACCCGTACAAGGGACAGAA12.71572e-06
AAACCCGTCCATGCATCTGCA12.71572e-06
AAACCCTAAATTGCAAATAGA12.71572e-06
AAACCCTAACGGTAGTAATTA12.71572e-06
AAACCCTATGTGTTTACCGTA12.71572e-06

Read fractions use all reads in this source file as the denominator.