P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGGTGCTCAAGTGAGAATA12.71572e-06
AAAGGTGCTTTCTTTCATTCA12.71572e-06
AAAGGTGGTCTTCAAAATTTA12.71572e-06
AAAGGTGTAAAAGAAACTGCA12.71572e-06
AAAGGTGTACTTTACTATATA12.71572e-06
AAAGGTGTACTTTCTTTTCGA12.71572e-06
AAAGGTGTATTTGGTTAATAA12.71572e-06
AAAGGTGTCCGTTTGGTAGCA12.71572e-06
AAAGGTGTGAAATTAAAAATA12.71572e-06
AAAGGTGTTCGAAGGAGGAAA12.71572e-06
AAAGGTGTTTGGCTCTAATGA12.71572e-06
AAAGGTTAAGGTCTTCACACA12.71572e-06
AAAGGTTAAGTATAAACCAAA12.71572e-06
AAAGGTTAATGATTATAGAGA12.71572e-06
AAAGGTTACAAGGAAGGTGAA12.71572e-06
AAAGGTTACACTCATGATTAA12.71572e-06
AAAGGTTACAGGTTGTGCTAA12.71572e-06
AAAGGTTAGGTTATGACAAAA12.71572e-06
AAAGGTTATACGTACGGACGA12.71572e-06
AAAGGTTATACTCCCTGTTGA12.71572e-06
AAAGGTTATCACTGACAATCA12.71572e-06
AAAGGTTATCATTCTTTAAAA12.71572e-06
AAAGGTTATCTAGATCCCACA12.71572e-06
AAAGGTTATGGATCAGTCCGA12.71572e-06
AAAGGTTATGGATTCGTTCAA12.71572e-06

Read fractions use all reads in this source file as the denominator.