P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTATTCGCACACGAATAA12.71572e-06
AAAGTATTCGCTTACCGGATA12.71572e-06
AAAGTATTCTCCAACATATCA12.71572e-06
AAAGTATTCTTATATACGTCA12.71572e-06
AAAGTATTCTTATGTTTCATA12.71572e-06
AAAGTATTGAGGGGATGTTCA12.71572e-06
AAAGTATTGTTAACCCGAATA12.71572e-06
AAAGTATTTATCGAACTCAAA12.71572e-06
AAAGTATTTGCGTGGTCCGAA12.71572e-06
AAAGTATTTTTCAGGTGACAA12.71572e-06
AAAGTCAAAATTCTGTTAGGA12.71572e-06
AAAGTCAAACTAATTCAGTGA12.71572e-06
AAAGTCAAACTTTAACCGACA12.71572e-06
AAAGTCAAAGCACCCACAAGA12.71572e-06
AAAGTCAACGATTCTCCTTAA12.71572e-06
AAAGTCAATTCGTTTCTCTTA12.71572e-06
AAAGTCACAGTCTGGGTATTA12.71572e-06
AAAGTCACCAATTACGACTAA12.71572e-06
AAAGTCACCAGTATGATAAAA12.71572e-06
AAAGTCACGGTGGGTATATCA12.71572e-06
AAAGTCACTACCGGATCCCGA12.71572e-06
AAAGTCACTAGTTAAATTGCA12.71572e-06
AAAGTCAGAGATGCGAAAACA12.71572e-06
AAAGTCAGAGTTGTCCCGGAA12.71572e-06
AAAGTCAGCCAAGCTCTGCTA12.71572e-06

Read fractions use all reads in this source file as the denominator.