P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130393

RV20_s

Reads
368,227
Distinct strings in file
366,714
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130393
Sample:
SAMEA13317629
SHA-256
71f47b9ac40a425bb6a288f6fb51dc08c31dc49016c4c1bf42b3d55d73436c21

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAACCTTTACGTCGTAGCTA12.71572e-06
AAAACCTTTATTTGGAATAAG12.71572e-06
AAAACCTTTTCCTGTTCCGAA12.71572e-06
AAAACGAAAGCAATAAAAAGA12.71572e-06
AAAACGAACAGAACTATGACA12.71572e-06
AAAACGAACATACAGTTTAGA12.71572e-06
AAAACGAATACAAATCGGAGA12.71572e-06
AAAACGAATACTATATATATA12.71572e-06
AAAACGAATGAGGATCTAAGA12.71572e-06
AAAACGAATGTTCTCATTACA12.71572e-06
AAAACGACAAGGGGCGCAGGA12.71572e-06
AAAACGACTAGTACCACCACA12.71572e-06
AAAACGATAGCATAAAGAAGA12.71572e-06
AAAACGATCATATATTAATCA12.71572e-06
AAAACGATCTAACGAGTGGAA12.71572e-06
AAAACGATGCTCCATTAAAAA12.71572e-06
AAAACGATGTGCGTCTTCAGA12.71572e-06
AAAACGATTACGCCATGAAAA12.71572e-06
AAAACGCAAGAGCTCGATGTA12.71572e-06
AAAACGCAATATATTGCGAAA12.71572e-06
AAAACGCAGAAATTACCTGCA12.71572e-06
AAAACGCATAGTCCCTTAGGA12.71572e-06
AAAACGCATCGTGAATGGTAA12.71572e-06
AAAACGCCCTCGCAAGCGCGA12.71572e-06
AAAACGCCGGACATAAAGATA12.71572e-06

Read fractions use all reads in this source file as the denominator.