P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTCGGAACAATGCGGTTA19.11843e-06
AAAGTCTACGTCGCTATTCTA19.11843e-06
AAAGTCTAGCCTAAACCAAGA19.11843e-06
AAAGTCTGAGACAAAAGTCTA19.11843e-06
AAAGTCTGGAGTAATTCCCCA19.11843e-06
AAAGTCTGTGCGTCACTTGAA19.11843e-06
AAAGTCTTACTTTAGCTGATA19.11843e-06
AAAGTCTTAGCGTACACCAAA19.11843e-06
AAAGTCTTGGATAGAAATCAA19.11843e-06
AAAGTGAATAACTATAAAAGA19.11843e-06
AAAGTGACATGTGATGAAGGA19.11843e-06
AAAGTGACGTTTTATTCGCAA19.11843e-06
AAAGTGAGCCTCTCAAGTCGA19.11843e-06
AAAGTGAGGCAAACCCATTTA19.11843e-06
AAAGTGAGTCCGGGGAGGGGA19.11843e-06
AAAGTGATGAGTTTTTTCATA19.11843e-06
AAAGTGATTGGAACAGAACTA19.11843e-06
AAAGTGCAGATTAATTCTAGA21.82369e-05
AAAGTGCAGCTTTTTTTTCCA19.11843e-06
AAAGTGCCATGTTTCCTTTAA19.11843e-06
AAAGTGCCTAAGGGAATTTCA19.11843e-06
AAAGTGCCTGTTAATTCAGTA19.11843e-06
AAAGTGCGATAAAACCTGTCA19.11843e-06
AAAGTGCGTGTGGTGCGGTGA19.11843e-06
AAAGTGCGTTTCACTAAAATA19.11843e-06

Read fractions use all reads in this source file as the denominator.