P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAATTATAGACTCACGTAA19.11843e-06
AAAAATTATTAGCGAGATCTA19.11843e-06
AAAAATTATTGGGAGGGCGGA19.11843e-06
AAAAATTCGTACCAGGTGATA19.11843e-06
AAAAATTCGTTTTCTCTGAAA19.11843e-06
AAAAATTCTATCGCGAAACTA19.11843e-06
AAAAATTCTGAAACTGATTTA19.11843e-06
AAAAATTGTTTTTGTCTTCGA21.82369e-05
AAAAATTTCACCGTTAGGCGA21.82369e-05
AAAAATTTCATCAACATCTAA19.11843e-06
AAAAATTTGCTTTGAACTACA19.11843e-06
AAAAATTTTATCATCGTCATA19.11843e-06
AAAAATTTTTCTCATATCGAA19.11843e-06
AAAACAAACTCTACCTGACTA19.11843e-06
AAAACAACTACTTTTCACTAA19.11843e-06
AAAACAAGAAGAGACAAAGGA19.11843e-06
AAAACAAGGATATATTCAATA19.11843e-06
AAAACAATCACCCTCGTGGTA19.11843e-06
AAAACAATGAGTCGGCCCCTA19.11843e-06
AAAACAATGTCTTAAAAAACA19.11843e-06
AAAACAATTGGTGTTATAATA19.11843e-06
AAAACAATTTGACGAACTTTA19.11843e-06
AAAACACAATTTCGTATGAGA19.11843e-06
AAAACACCTCTCTTGCGTATA19.11843e-06
AAAACACTCATCCCTTCTAGA19.11843e-06

Read fractions use all reads in this source file as the denominator.