P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATCCGGGTAGCTGTATCTA19.11843e-06
AAATCCGGTACCCTAATCCAA19.11843e-06
AAATCCGTCAGTCCAGTATAA19.11843e-06
AAATCCGTCCTATCCAAATTA19.11843e-06
AAATCCTAAGGGTTTATAGCA19.11843e-06
AAATCCTACTTACAGATTAGA19.11843e-06
AAATCCTATACCTGGATTCCA19.11843e-06
AAATCCTGTCCGTGTTAAGAA19.11843e-06
AAATCCTTATCCATCCTCAAA19.11843e-06
AAATCCTTGAGTCTTAGGGTA19.11843e-06
AAATCCTTGGGATCTGATACA19.11843e-06
AAATCCTTTTACTTTTTGAAA19.11843e-06
AAATCCTTTTTCAAAAGCTTA19.11843e-06
AAATCGAATTCAAGTCTTTGA19.11843e-06
AAATCGAATTGACGGATTGCA19.11843e-06
AAATCGATCCGTAAAACCTTA19.11843e-06
AAATCGCACCCACGCTTATGA19.11843e-06
AAATCGCGAGGGGCCTAAGCA19.11843e-06
AAATCGGCGCTAGCCGGCTGA19.11843e-06
AAATCGGCTCATAAGAAATAA19.11843e-06
AAATCGGGTAACAATAGTGTA19.11843e-06
AAATCGGGTGAAGGGGAGGAA19.11843e-06
AAATCGGGTGTTCATGGTGAA19.11843e-06
AAATCGGTAATACTCACGTAA19.11843e-06
AAATCGGTTTGACTACTCCAA19.11843e-06

Read fractions use all reads in this source file as the denominator.